| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 13 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| small nucleolar ribonucleoprotein complex | 5.6097E-18 | 13 | 72 | 10 | 6292 |
| nuclear outer membrane | 1.0651E-12 | 13 | 86 | 8 | 6292 |
| nuclear membrane | 2.8783E-12 | 13 | 97 | 8 | 6292 |
| ribonucleoprotein complex | 6.5586E-11 | 13 | 514 | 11 | 6292 |
| outer membrane | 4.0034E-10 | 13 | 178 | 8 | 6292 |
| organelle outer membrane | 4.0034E-10 | 13 | 178 | 8 | 6292 |
| nuclear envelope | 9.7879E-10 | 13 | 199 | 8 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 3.3284E-9 | 13 | 232 | 8 | 6292 |
| nucleolus | 6.2479E-8 | 13 | 211 | 7 | 6292 |
| endomembrane system | 2.3251E-7 | 13 | 398 | 8 | 6292 |
| preribosome | 4.9105E-7 | 13 | 34 | 4 | 6292 |
| envelope | 1.4632E-6 | 13 | 505 | 8 | 6292 |
| organelle envelope | 1.4632E-6 | 13 | 505 | 8 | 6292 |
| nuclear lumen | 1.1227E-5 | 13 | 453 | 7 | 6292 |
| membrane part | 1.1464E-5 | 13 | 662 | 8 | 6292 |
| organelle membrane | 1.5996E-5 | 13 | 692 | 8 | 6292 |
| macromolecular complex | 1.6165E-5 | 13 | 1635 | 11 | 6292 |
| nuclear part | 5.5135E-5 | 13 | 1103 | 9 | 6292 |
| small-subunit processome | 5.8841E-5 | 13 | 6 | 2 | 6292 |
| preribosome, small subunit precursor | 5.8841E-5 | 13 | 6 | 2 | 6292 |
| organelle lumen | 1.3182E-4 | 13 | 660 | 7 | 6292 |
| intracellular organelle lumen | 1.3182E-4 | 13 | 660 | 7 | 6292 |
| membrane-enclosed lumen | 1.9222E-4 | 13 | 700 | 7 | 6292 |
| membrane | 8.722E-4 | 13 | 1198 | 8 | 6292 |
| non-membrane-bounded organelle | 1.3788E-3 | 13 | 959 | 7 | 6292 |
| intracellular non-membrane-bounded organelle | 1.3788E-3 | 13 | 959 | 7 | 6292 |
| nucleolar part | 3.7109E-3 | 13 | 45 | 2 | 6292 |
| Noc4p-Nop14p complex | 4.1283E-3 | 13 | 2 | 1 | 6292 |
| nucleus | 7.1693E-3 | 13 | 2041 | 9 | 6292 |
| RENT complex | 8.2408E-3 | 13 | 4 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rRNA processing | 1.2068E-17 | 13 | 128 | 11 | 6292 |
| rRNA metabolic process | 2.6184E-17 | 13 | 137 | 11 | 6292 |
| ribosome biogenesis | 3.3886E-17 | 13 | 346 | 13 | 6292 |
| ribonucleoprotein complex biogenesis | 9.4812E-17 | 13 | 374 | 13 | 6292 |
| ncRNA processing | 4.2348E-15 | 13 | 215 | 11 | 6292 |
| ncRNA metabolic process | 3.1081E-14 | 13 | 257 | 11 | 6292 |
| cellular component biogenesis | 3.2337E-13 | 13 | 694 | 13 | 6292 |
| RNA processing | 2.3731E-12 | 13 | 380 | 11 | 6292 |
| maturation of SSU-rRNA | 7.2592E-12 | 13 | 59 | 7 | 6292 |
| RNA metabolic process | 5.3775E-8 | 13 | 954 | 11 | 6292 |
| gene expression | 1.2671E-6 | 13 | 1283 | 11 | 6292 |
| nucleic acid metabolic process | 3.5616E-6 | 13 | 1415 | 11 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 1.0311E-5 | 13 | 1566 | 11 | 6292 |
| cellular nitrogen compound metabolic process | 3.6818E-5 | 13 | 1770 | 11 | 6292 |
| nitrogen compound metabolic process | 4.1589E-5 | 13 | 1791 | 11 | 6292 |
| cellular macromolecule metabolic process | 4.9766E-4 | 13 | 2285 | 11 | 6292 |
| rRNA modification | 5.9184E-4 | 13 | 18 | 2 | 6292 |
| macromolecule metabolic process | 6.5617E-4 | 13 | 2349 | 11 | 6292 |
| ribosomal small subunit biogenesis | 1.2455E-3 | 13 | 26 | 2 | 6292 |
| primary metabolic process | 5.1003E-3 | 13 | 2896 | 11 | 6292 |
| cellular metabolic process | 7.9165E-3 | 13 | 3033 | 11 | 6292 |
| RNA modification | 8.7926E-3 | 13 | 70 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| snoRNA binding | 1.6468E-16 | 13 | 31 | 8 | 6292 |
| RNA binding | 1.2363E-7 | 13 | 367 | 8 | 6292 |
| nucleic acid binding | 1.1996E-5 | 13 | 666 | 8 | 6292 |
| binding | 2.0459E-4 | 13 | 1294 | 9 | 6292 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| rRNA (adenine) methyltransferase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |