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Protein Overview: HIR2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run HIR2 No Comments Green EM, et al (2005)
View Run ASF1 sample 3121 run on DecaLCQ: searched for phosphorylation Green EM, et al (2005)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
View Run RLF2 identification data - first search in cascade Green EM, et al (2005)
View Run ASF1 sample 3928 - Asf1-S-TEV-ZZ (in hir3delta mutant) Green EM, et al (2005)
View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data HIR2 Huh WK, et al. (2003)
View Data HIR2 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..85] MSA 1.652995 View MSA. No confident structure predictions are available.
2 View Details [86..473] PSI-BLAST 70.39794 beta1-subunit of the signal-transducing G protein heterotrimer
3 View Details [474..698] MSA 23.515997 View MSA. No confident structure predictions are available.
4 View Details [699..752] deduced N/A No confident structure predictions are available.
5 View Details [753..875] ORFEUS 7.63 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 2.79445416141967 bayes_pls_golite062009
  • binding
  • 2.42570478946173 bayes_pls_golite062009
  • transcription regulator activity
  • 2.3610959773142 bayes_pls_golite062009
  • nucleic acid binding
  • 2.30918780727915 bayes_pls_golite062009
  • transcription repressor activity
  • 2.29049708962212 bayes_pls_golite062009
  • DNA binding
  • 1.71685536470455 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.41752877005447 bayes_pls_golite062009
  • protein binding
  • 1.21879977456466 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.19593750149343 bayes_pls_golite062009
  • transcription factor activity
  • 1.08768505897883 bayes_pls_golite062009
  • 0.88172763425403 bayes_pls_golite062009
  • histone binding
  • 0.685319917508843 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.676924760416604 bayes_pls_golite062009
  • actin binding
  • 0.529861581509437 bayes_pls_golite062009
  • transcription factor binding
  • 0.489473003915035 bayes_pls_golite062009
  • snoRNA binding
  • 0.347797037104681 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.30761651528651 bayes_pls_golite062009
  • transporter activity
  • 0.284701931503833 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.164101908612691 bayes_pls_golite062009
  • chromatin binding
  • 0.151977098745772 bayes_pls_golite062009
  • structural molecule activity
  • 0.0936365746095786 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
  • 5.23858959608048 bayes_pls_golite062009
  • DNA binding
  • 4.78517210147551 bayes_pls_golite062009
  • nucleic acid binding
  • 4.72059012764202 bayes_pls_golite062009
  • transcription factor activity
  • 4.02736190679869 bayes_pls_golite062009
  • transcription repressor activity
  • 3.60278632732466 bayes_pls_golite062009
  • binding
  • 3.37660003833383 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 2.84400558797599 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.41045867230388 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.21432668306508 bayes_pls_golite062009
  • transcription activator activity
  • 2.13702350917359 bayes_pls_golite062009
  • transcription elongation regulator activity
  • 1.75305601393584 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.795220428630727 bayes_pls_golite062009
  • transcription factor binding
  • 0.752335897765285 bayes_pls_golite062009
  • protein binding
  • 0.726445167461826 bayes_pls_golite062009
  • specific transcriptional repressor activity
  • 0.710995647413393 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.490809930581315 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.252392400929265 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.224230323813474 bayes_pls_golite062009
  • structural molecule activity
  • 0.128347187436068 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
  • 0.0406721670764369 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle