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Protein Overview: RRI2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run BOI1 Sample boi1 with gst from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen PRP16 RRI2 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RRI2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..275] deduced N/A No confident structure predictions are available.
2 View Details [276..560] ORFEUS 8.19 Hemolysin E (HlyE, ClyA, SheA)
3 View Details [561..645] deduced N/A No confident structure predictions are available.
4 View Details [414..559] FFAS03 1.38 Solution structure of the PCI domain
5 View Details [560..645] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • transcription regulator activity
  • 3.45730892915196 bayes_pls_golite062009
  • binding
  • 3.37660003833383 bayes_pls_golite062009
  • DNA binding
  • 3.14200456972385 bayes_pls_golite062009
  • nucleic acid binding
  • 3.10521633426493 bayes_pls_golite062009
  • transcription factor activity
  • 2.53044123488453 bayes_pls_golite062009
  • transcription repressor activity
  • 2.13838000453063 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 1.28416365596732 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.21263034180893 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 1.12766532785895 bayes_pls_golite062009
  • transcription activator activity
  • 1.04520012516585 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 0.761838897494019 bayes_pls_golite062009
  • protein binding
  • 0.726445167461826 bayes_pls_golite062009
  • transcription factor binding
  • 0.534573074451495 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.49516964123412 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.224432853777564 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle