| General Information: |
|
| Name(s) found: |
VPS53 /
YJL029C
[SGD]
|
| Description(s) found:
Found 26 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 822 amino acids |
Gene Ontology: |
|
| Cellular Component: |
GARP complex
[IPI ]
cytoplasm [IDA ]
Golgi apparatus [IDA ][TAS]
|
| Biological Process: |
retrograde transport, endosome to Golgi
[IDA]
Golgi to vacuole transport [IMP ]
|
| Molecular Function: |
protein binding
[IPI]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MLEGTVDYDP LEDITNILFS KESLNNIDEL ISITRSYKKQ LQEDILKEEN ELKEHPKNSA 60
61 EIEASLRKVF QDFKETQDVS ASTELTISNL TEGISYLDIA KKNLTHSLTL FQNLKILTDS 120
121 YIQCNELLSQ GSFKKMVSPY KIMCSLAENT FISYKSLDEI NYLLSSISRL KGDTLSKIKQ 180
181 NYNALFSGGN ISEHDTALTM ELREGACELL DCDTSTRAQM IDWCLDKLLF EMKEIFRVDD 240
241 EAGSLENLSR RYIYFKKILN NFNSKFADYF LKDWEMAVRL TTTFYHITHK DLQTLLKREF 300
301 KDKNPSIDLF MTALQSTLDF EKYIDVRFSK KIKEPKLSSC FEPYLTLWVS HQNQMMEKKF 360
361 LSYMSEPKYP SNETESLVLP SSADLFRTYR SVLTQTLELI DNNANDSILT SLANFFSRWL 420
421 QTYSQKILLP LLLPDNIEVQ DKLEAAKYTV LLINTADYCA TTIDQLEDKL SEFSGNREKL 480
481 ANSFTKTKNI YDDLLAKGTS FLLNRVIPLD LNFVWREFIN NDWSNAAIED YSRYMVTLKS 540
541 VLKMPALTDA SIKQQQEQPS TLAFILSQFN RDVYKWNFLD KVIDIITTNF VSNTIRLLQP 600
601 VPPFSLAGSK RKFETRTVVN IGEQLLLDLE LLKEIFHTLP ESVSNDSDLR ENTSYKRVKR 660
661 HADNNIDQLL KFIKLLMAPL DSADDYYETY SKLTNNNPDS AVWSFVLALK GIPWDLALWK 720
721 KLWSAYNLET DDTDEGSRPD SNRDLFIFKW DKVLLGQFEN NLARMQDPNW SKFVRQDLKI 780
781 SPPVMKRIVS TPQIQQQKEE QKKQSLSVKD FVSHSRFFNR GT |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
VPS52 VPS53 VPS54 |
| View Details | Krogan NJ, et al. (2006) |
|
TOR1 VPS52 VPS53 VPS54 |
| View Details | Gavin AC, et al. (2006) |
|
KAR2 VPS52 VPS53 VPS54 |
| View Details | Gavin AC, et al. (2002) |
|
ACT1 AIM31 CFT1 CFT2 CKA1 CLP1 ENO2 FIP1 GLC7 HHF1, HHF2 HTA1 MPE1 PAP1 PCF11 PFK1 PFS2 PTA1 PTI1 REF2 RNA14 RNA15 RSA3 SEC13 SEC31 SSA3 SSU72 SYC1 TAF6 TIF4632 TYE7 VID24 VMR1 VPS51 VPS52 VPS53 VPS54 YCL046W YSH1 YTH1 |
| View Details | Qiu et al. (2008) |
|
APL4 VPS51 VPS52 VPS53 VPS54 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..30] [219..520] |
 |
7.96 | (+)-bornyl diphosphate synthase |
| 2 | View Details | [31..49] [67..77] [191..218] |
|
7.96 | (+)-bornyl diphosphate synthase |
| 3 | View Details | [50..66] [78..190] |
|
7.96 | (+)-bornyl diphosphate synthase |
| 4 | View Details | [521..822] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)