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Protein Overview: EFB1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run PSF2 No Comments Hazbun TR, et al. (2003)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run ASF1 sample 3928 - Asf1-S-TEV-ZZ (in hir3delta mutant) Green EM, et al (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen NUP2 EFB1 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..87] PSI-BLAST 5.69897 Class delta GST
2 View Details [88..206] PSI-BLAST 464.741366 Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • protein binding
  • 1.65945313523198 bayes_pls_golite062009
  • binding
  • 1.45526122320486 bayes_pls_golite062009
  • transferase activity
  • 1.05573069897577 bayes_pls_golite062009
  • catalytic activity
  • 0.963623964325467 bayes_pls_golite062009
  • receptor binding
  • 0.490857233487879 bayes_pls_golite062009
  • nucleic acid binding
  • 0.46030380837916 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
  • 0.44372379417457 bayes_pls_golite062009
  • transcription regulator activity
  • 0.385619646192102 bayes_pls_golite062009
  • RNA binding
  • 0.382017633056715 bayes_pls_golite062009
  • peptide binding
  • 0.22963019108532 bayes_pls_golite062009
  • glutathione transferase activity
  • 0.20688408808374 bayes_pls_golite062009
  • DNA binding
  • 0.175092771820973 bayes_pls_golite062009
    2
    Term Confidence Notes
  • translation elongation factor activity
  • 12.3173391557088 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 7.81664120156021 bayes_pls_golite062009
  • translation regulator activity
  • 7.77673515271111 bayes_pls_golite062009
  • binding
  • 2.83703195704118 bayes_pls_golite062009
  • nucleic acid binding
  • 2.61354904861592 bayes_pls_golite062009
  • actin binding
  • 1.90340345597574 bayes_pls_golite062009
  • protein binding
  • 1.74079757896683 bayes_pls_golite062009
  • signal transducer activity
  • 1.65423237700268 bayes_pls_golite062009
  • molecular transducer activity
  • 1.65423237700268 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.63487486759233 bayes_pls_golite062009
  • GTPase regulator activity
  • 0.669814437561164 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
  • 0.651746786837234 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
  • 0.555069882515023 bayes_pls_golite062009
  • enzyme regulator activity
  • 0.260738180200771 bayes_pls_golite062009
  • actin monomer binding
  • 0.2298282502586 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle