From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
Notes: | From the published set of core protein complex predictions. |
Complex Size: | 10 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
origin recognition complex | 2.4426E-18 | 10 | 6 | 6 | 6292 |
nuclear origin of replication recognition complex | 2.4426E-18 | 10 | 6 | 6 | 6292 |
pre-replicative complex | 1.9454E-14 | 10 | 16 | 6 | 6292 |
protein-DNA complex | 8.6198E-11 | 10 | 57 | 6 | 6292 |
nucleoplasm part | 1.9879E-10 | 10 | 245 | 8 | 6292 |
nucleoplasm | 3.6235E-10 | 10 | 264 | 8 | 6292 |
nuclear lumen | 2.6926E-8 | 10 | 453 | 8 | 6292 |
nuclear chromosome part | 1.3314E-7 | 10 | 190 | 6 | 6292 |
nuclear chromosome | 3.9443E-7 | 10 | 228 | 6 | 6292 |
chromosomal part | 4.9632E-7 | 10 | 237 | 6 | 6292 |
organelle lumen | 5.2324E-7 | 10 | 660 | 8 | 6292 |
intracellular organelle lumen | 5.2324E-7 | 10 | 660 | 8 | 6292 |
membrane-enclosed lumen | 8.2941E-7 | 10 | 700 | 8 | 6292 |
chromosome | 1.1708E-6 | 10 | 274 | 6 | 6292 |
nuclear part | 2.8079E-5 | 10 | 1103 | 8 | 6292 |
protein complex | 3.542E-5 | 10 | 1137 | 8 | 6292 |
nucleus | 2.7855E-4 | 10 | 2041 | 9 | 6292 |
macromolecular complex | 5.4804E-4 | 10 | 1635 | 8 | 6292 |
non-membrane-bounded organelle | 1.4928E-3 | 10 | 959 | 6 | 6292 |
intracellular non-membrane-bounded organelle | 1.4928E-3 | 10 | 959 | 6 | 6292 |
histone acetyltransferase complex | 2.0756E-3 | 10 | 44 | 2 | 6292 |
organelle part | 6.1675E-3 | 10 | 2282 | 8 | 6292 |
intracellular organelle part | 6.1675E-3 | 10 | 2282 | 8 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
DNA replication origin binding | 4.1755E-15 | 10 | 13 | 6 | 6292 |
sequence-specific DNA binding | 3.7892E-11 | 10 | 50 | 6 | 6292 |
DNA binding | 7.8367E-7 | 10 | 256 | 6 | 6292 |
binding | 9.4788E-5 | 10 | 1294 | 8 | 6292 |
nucleic acid binding | 1.9872E-4 | 10 | 666 | 6 | 6292 |
histone binding | 2.0481E-4 | 10 | 14 | 2 | 6292 |