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Protein Overview: YJR154W

General Information:
Name(s) found: YJR154W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTDSHNLSE PYNIGGQKYI NMKKKEDLGV CQPGLTQKAF TVEDKFDYKA IIEKMEVYGL  60
   61 CVVKNFIETS RCDEILKEIE PHFYRYESWQ GSPFPKETTV ATRSVLHSST VLKDVVCDRM 120
  121 FCDISKHFLN EENYFAAGKV INKCTSDIQL NSGIVYKVGA GASDQGYHRE DIVHHTTHQA 180
  181 CERFQYGTET MVGLGVAFTD MNKENGSTRM IVGSHLWGPH DSCGNFDKRM EFHVNVAKGD 240
  241 AVLFLGSLYH AASANRTSQD RVAGYFFMTK SYLKPEENLH LGTDLRVFKG LPLEALQLLG 300
  301 LGISEPFCGH IDYKSPGHLI SSSLFENDIE KGYYGETIRV NYGSTQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) HAT2 HIF1 YJR154W
    View Details Krogan NJ, et al. (2006) HAT1 HAT2 ORC1 ORC2 ORC3 ORC4 ORC5 ORC6 SWE1 YJR154W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YJR154W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] MSA 16.044978 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.154892236593256 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle