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Protein Overview: nas-4

General Information:
Name(s) found: nas-4 / CE37080 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00003523 locus:nas-4 Zinc metalloproteinase nas-4 status:Confirmed UniProt:P55112 protein_id:CCD63195.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    astacin activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTIQRYSLV FCAIFATCWT ASVVNNKQVI DTSVPQTETT LNDADFHSDL HQRYDLQTLG  60
   61 IKVKDDPTIG NYSEGDILLE SPKKFVEENN KLGRNAIKQI YRRWPNNEIP YTLSSQYGSY 120
  121 ARSVIANAMN EYHTKTCVKF VARDPSKHHD YLWIHPDEGC YSLVGKTGGK QPVSLDSGCI 180
  181 QVGTIVHELM HAVGFFHEQS RQDRDSYIDV VWQNVMNGAD DQFEKYNLNV ISHLDEPYDY 240
  241 ASIMHYGPYA FSGSGKKTLV PKKSGSERMG QRVKFSDIDV RKINKLYNCP GVSGNNNNNN 300
  301 NNQINSNSIV NHPQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] PSI-BLAST 26.0 CRYSTAL STRUCTURE OF FIBROBLAST STROMELYSIN-1: THE C-TRUNCATED HUMAN PROENZYME
    2 View Details [80..315] PSI-BLAST 46.0 STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  4.1917763812737 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.85190688399485 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.22757426039234 bayes_pls_golite062009
  • endopeptidase activity
    		•  2.98133341931091 bayes_pls_golite062009
  • hydrolase activity
    		•  2.78513171530601 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  2.54952091441017 bayes_pls_golite062009
  • binding
    		•  0.910292205820092 bayes_pls_golite062009
  • catalytic activity
    		•  0.891187593353827 bayes_pls_golite062009
  • protein binding
    		•  0.553658909577001 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.492456025063956 bayes_pls_golite062009
  • receptor activity
    		•  0.332822250208465 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.136560284009247 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.00533877867882504 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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