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Protein Overview: 2MMP_ARATH

General Information:
Name(s) found: 2MMP_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||E96724 hypothetical protein F20P5.11 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2194124|gb|AAB61099.1| Similar to Glycine metalloendoproteinase (gb|U63725). [Arabidopsis thaliana] [NCBI NR]
  • gi|15223067|ref|NP_177174.1| MMP (MATRIX METALLOPROTEINASE); metalloendopeptidase/ metallopeptidase [Arabidopsis thaliana] [NCBI NR]
  • Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1 [Swiss-Prot]
  • (O04529) F20P5.11 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein F20P5.11 [imported] - Arabidopsis thalianagi|2194124|gb|AAB61099.1| Similar to Glycine metalloendoproteinase (gb|U63725). [Arabidopsis thaliana]gi|15223067|ref|NP_177174.1| matrixin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Matrixin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MMP | MMP (MATRIX METALLOPROTEINASE); metalloendopeptidase | chr1:26427668-26428804 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Similar to Glycine metalloendoproteinase (gb|U63725). [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MMP (MATRIX METALLOPROTEINASE); metalloendopeptidase/ metallopeptidase/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MMP | matrix metalloproteinase | chr1:26424005-26425141 FORWARD LENGTH=378 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F20P5.11 protein OS=Arabidopsis thaliana GN=F20P5.11 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: proteolysis [IEA][ISS]
    metabolic process [IEA]
    Molecular Function: metalloendopeptidase activity [IEA][ISS]
    metallopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFCVFGFLS LFLIVSPASA WFFPNSTAVP PSLRNTTRVF WDAFSNFTGC HHGQNVDGLY  60
   61 RIKKYFQRFG YIPETFSGNF TDDFDDILKA AVELYQTNFN LNVTGELDAL TIQHIVIPRC 120
  121 GNPDVVNGTS LMHGGRRKTF EVNFSRTHLH AVKRYTLFPG EPRWPRNRRD LTYAFDPKNP 180
  181 LTEEVKSVFS RAFGRWSDVT ALNFTLSESF STSDITIGFY TGDHGDGEPF DGVLGTLAHA 240
  241 FSPPSGKFHL DADENWVVSG DLDSFLSVTA AVDLESVAVH EIGHLLGLGH SSVEESIMYP 300
  301 TITTGKRKVD LTNDDVEGIQ YLYGANPNFN GTTSPPSTTK HQRDTGGFSA AWRIDGSSRS 360
  361 TIVSLLLSTV GLVLWFLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] PSI-BLAST 76.154902 X-ray structure of human proMMP-1: New insights into collagenase action

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.33358263548929 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.99457783001146 bayes_pls_golite062009
  • endopeptidase activity
    		•  4.16532996235931 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.94798058866011 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  3.43236442601127 bayes_pls_golite062009
  • hydrolase activity
    		•  2.63109625301237 bayes_pls_golite062009
  • receptor binding
    		•  2.39767049122449 bayes_pls_golite062009
  • exopeptidase activity
    		•  2.07461908743946 bayes_pls_golite062009
  • binding
    		•  1.08558665967526 bayes_pls_golite062009
  • catalytic activity
    		•  0.891187593353827 bayes_pls_golite062009
  • growth factor activity
    		•  0.720944017870466 bayes_pls_golite062009
  • integrin binding
    		•  0.57684135424992 bayes_pls_golite062009
  • zinc ion binding
    		•  0.49304764842799 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.489265029264191 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.393080846858665 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.374597710524442 bayes_pls_golite062009
  • protein binding
    		•  0.2751534129453 bayes_pls_golite062009
  • peptidyl-dipeptidase activity
    		•  0.27229268642689 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  0.252655558968584 bayes_pls_golite062009
  • cytokine receptor binding
    		•  0.0255053415182105 bayes_pls_golite062009
  • ion binding
    		•  0.0127744064783182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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