| Protein: | 2MMP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 378 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 2MMP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..1] | [378..1] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MRFCVFGFLS LFLIVSPASA WFFPNSTAVP PSLRNTTRVF WDAFSNFTGC HHGQNVDGLY 60
61 RIKKYFQRFG YIPETFSGNF TDDFDDILKA AVELYQTNFN LNVTGELDAL TIQHIVIPRC 120
121 GNPDVVNGTS LMHGGRRKTF EVNFSRTHLH AVKRYTLFPG EPRWPRNRRD LTYAFDPKNP 180
181 LTEEVKSVFS RAFGRWSDVT ALNFTLSESF STSDITIGFY TGDHGDGEPF DGVLGTLAHA 240
241 FSPPSGKFHL DADENWVVSG DLDSFLSVTA AVDLESVAVH EIGHLLGLGH SSVEESIMYP 300
301 TITTGKRKVD LTNDDVEGIQ YLYGANPNFN GTTSPPSTTK HQRDTGGFSA AWRIDGSSRS 360
361 TIVSLLLSTV GLVLWFLP
|
| Detection Method: |  |
| Confidence: | 76.154902 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.63109625301237 | bayes_pls_golite062009 |
| receptor binding | 2.39767049122449 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| binding | 1.08558665967526 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| growth factor activity | 0.720944017870466 | bayes_pls_golite062009 |
| integrin binding | 0.57684135424992 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.489265029264191 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| protein binding | 0.2751534129453 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.27229268642689 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| cytokine receptor binding | 0.0255053415182105 | bayes_pls_golite062009 |
| ion binding | 0.0127744064783182 | bayes_pls_golite062009 |
