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Protein Overview: LACS9_ARATH

General Information:
Name(s) found: LACS9_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana GN=LACS9 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 691 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [IDA]
    chloroplast envelope [IDA]
    Biological Process: fatty acid biosynthetic process [ISS]
    fatty acid metabolic process [TAS]
    Molecular Function: long-chain fatty acid-CoA ligase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL  60
   61 PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH LGDYEWLTFG KTLEAVCDFA 120
  121 SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT 180
  181 TVICGSKELK KLMDISQQLE TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN 240
  241 FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL 300
  301 ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV 360
  361 RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL WDVLVFRKIR AVLGGQIRYL 420
  421 LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL 480
  481 VDWAEGGYLT SDKPMPRGEI VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF 540
  541 HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS 600
  601 QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW 660
  661 TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..691] PSI-BLAST 136.0 Acetyl-CoA synthetase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  3.91760861837127 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  3.07782226172454 bayes_pls_golite062009
  • CoA-ligase activity
    		•  2.9342873477171 bayes_pls_golite062009
  • lipid transporter activity
    		•  2.59608399999188 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  2.59273384982209 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  1.85528760311176 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.51984692702316 bayes_pls_golite062009
  • transporter activity
    		•  1.29780964436121 bayes_pls_golite062009
  • branched-chain aliphatic amino acid transmembrane transporter activity
    		•  1.18574343794772 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.12905679329698 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  1.11961482903654 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07143339827205 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.03753946113449 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  0.981725396165671 bayes_pls_golite062009
  • long-chain fatty acid transporter activity
    		•  0.914069798020245 bayes_pls_golite062009
  • hydrolase activity
    		•  0.793506623954019 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  0.75860693537743 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.54797726647835 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.340243634970102 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.320997446710099 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.251681382273558 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.225448500718996 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.216579620878492 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.177812048124158 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.174283007890308 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.173963339749644 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.149232835558857 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0401881910649647 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.0047964784091391 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle