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View Structure Prediction Details

Protein: LACS9_ARATH
Organism: Arabidopsis thaliana
Length: 691 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS9_ARATH.

Description E-value Query
Range
Subject
Range
gi|12049721 - gi|12049721|emb|CAC19877.1| long chain acyl-CoA synthetase [Brassica napus]
570.0 [0..1] [691..1]

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Predicted Domain #1
Region A:
Residues: [1-691]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL  60
   61 PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH LGDYEWLTFG KTLEAVCDFA 120
  121 SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT 180
  181 TVICGSKELK KLMDISQQLE TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN 240
  241 FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL 300
  301 ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV 360
  361 RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL WDVLVFRKIR AVLGGQIRYL 420
  421 LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL 480
  481 VDWAEGGYLT SDKPMPRGEI VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF 540
  541 HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS 600
  601 QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW 660
  661 TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 136.0
Match: 1pg3A
Description: Acetyl-CoA synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
fatty acid ligase activity 4.83067429373059 bayes_pls_golite062009
long-chain fatty acid-CoA ligase activity 4.72692389032116 bayes_pls_golite062009
ligase activity, forming carbon-sulfur bonds 3.91760861837127 bayes_pls_golite062009
acid-thiol ligase activity 3.07782226172454 bayes_pls_golite062009
CoA-ligase activity 2.9342873477171 bayes_pls_golite062009
lipid transporter activity 2.59608399999188 bayes_pls_golite062009
fatty acid transporter activity 2.59273384982209 bayes_pls_golite062009
ligase activity 2.49556073715112 bayes_pls_golite062009
acetate-CoA ligase activity 1.85528760311176 bayes_pls_golite062009
catalytic activity 1.83545185797733 bayes_pls_golite062009
binding 1.5312519256537 bayes_pls_golite062009
transcription regulator activity 1.51984692702316 bayes_pls_golite062009
transporter activity 1.29780964436121 bayes_pls_golite062009
branched-chain aliphatic amino acid transmembrane transporter activity 1.18574343794772 bayes_pls_golite062009
organic acid transmembrane transporter activity 1.12905679329698 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 1.11961482903654 bayes_pls_golite062009
transmembrane transporter activity 1.07143339827205 bayes_pls_golite062009
substrate-specific transporter activity 1.03753946113449 bayes_pls_golite062009
luciferin monooxygenase activity 0.981725396165671 bayes_pls_golite062009
long-chain fatty acid transporter activity 0.914069798020245 bayes_pls_golite062009
hydrolase activity 0.793506623954019 bayes_pls_golite062009
amine transmembrane transporter activity 0.75860693537743 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.54797726647835 bayes_pls_golite062009
adenyl ribonucleotide binding 0.340243634970102 bayes_pls_golite062009
adenyl nucleotide binding 0.320997446710099 bayes_pls_golite062009
active transmembrane transporter activity 0.251681382273558 bayes_pls_golite062009
primary active transmembrane transporter activity 0.225448500718996 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.216579620878492 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.177812048124158 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.174283007890308 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.173963339749644 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.149232835558857 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0401881910649647 bayes_pls_golite062009
pyrophosphatase activity 0.0047964784091391 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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