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Protein Overview: gi|15237516, gi|...

General Information:
Name(s) found: gi|15237516 [NCBI NR]
gi|10177970 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15237516|ref|NP_198907.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1104 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSSPSDFK RYHVFSSFHG PDVRSGFLSH LHNHFESKGI TPFKDQEIER GHTIGPELIQ  60
   61 AIRESRVSIV VLSEKYASSC WCLDELVEIL KCKEASGQVV MTIFYKVDPS DVRKQRGDFG 120
  121 STFKKTCEGK TWIVKQRWIK ALEYIATVAG EHSLSWANEA ELIQKIATDV SNKLNLTPSR 180
  181 DFEGMVGLEA HLTKLDSFLC LESDDVKMIG IWGPAGIGKT TIARALFNQL STGFRLSCFM 240
  241 GTIDVNDYDS KLCLQNKLLS KILNQKDMKI HHLGAIEEWL HNQRVLIVLD DVDDLEQLEV 300
  301 LAKESSWFGH GSRIIVSLND RKILKAHGIN DIYDVDFPSE EEALEILCLS AFKQNSPQDG 360
  361 FEEVAKRVVE LCGKLPLGLR VVGSSFYGES EDEWRIQLYG IETNLDRKIE NVLRVGYDKL 420
  421 SERHQSLFLH IACFFNHKSV DYVTTMLADS TLDVENGLKT LAAKSLVSTN GWITMHCLLQ 480
  481 QLGRQVVVQQ GDPGKRQFLV EAKEIRDVLA NETGTESVIG ISFDISKIET LSISKRAFNR 540
  541 MRNLKFLNFY NGSVSLLEDM EYLPRLRLLY WGSYPRKSLP LTFKPECLVE LYMGFSKLEK 600
  601 LWGGIQPLTN LKKINLGYSS NLKEIPNLSK ATNLKTLTLT GCESLVEIPS SIWNLQKLEM 660
  661 LYASGCIKLQ VIPTNINLAS LEEVNMSNCS RLRSFPDISS NIKRLYVAGT MIKEFPASIV 720
  721 GHWCRLDFLQ IGSRSLKRLT HVPESVTHLD LRNSDIKMIP DCVIGLPHLV SLLVENCTKL 780
  781 VSIQGHSPSL VTLFADHCIS LKSVCCSFHG PISKLMFYNC LKLDKESKRG IIQQSGNKSI 840
  841 CLPGKEIPAE FTHQTIGNLI TISLAPGCEE AYSTFSRFKA CLLLSPIKNF AFNKINCFLR 900
  901 SKGVEISRTT ESIYPFVSGG SLSEHLFIFC GDLFPEENRS LMDVTPNEIL FDFSSSDVEI 960
  961 VECGVKIFLS SGIEVGYCET GGNRNHHIDG EAEAFKVTQV ENSKHTGHWS WLRKLRLGKK1020
 1021 KMKNNKTELS SRPVSGFSDL TRGIFIRYQE PEAVELTKDE RITDLSSLLC IGSLVVCFFL1080
 1081 SVFFGQPLVV SVLLLFSCFF LQMQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] FFAS03 4.5 Toll-like receptor 1, TLR1
    2 View Details [159..527] PSI-BLAST 4.221849 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [528..1104] PSI-BLAST 23.69897 The molecular structure of toll-like receptor 3 ligand binding domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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