| Protein: | gi|15237516, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1104 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237516, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..1] | [1009..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MAFSSPSDFK RYHVFSSFHG PDVRSGFLSH LHNHFESKGI TPFKDQEIER GHTIGPELIQ 60
61 AIRESRVSIV VLSEKYASSC WCLDELVEIL KCKEASGQVV MTIFYKVDPS DVRKQRGDFG 120
121 STFKKTCEGK TWIVKQRWIK ALEYIATVAG EHSLSWAN
|
| Detection Method: |  |
| Confidence: | 4.5 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [159-527] |
1 11 21 31 41 51
| | | | | |
1 EAELIQKIAT DVSNKLNLTP SRDFEGMVGL EAHLTKLDSF LCLESDDVKM IGIWGPAGIG 60
61 KTTIARALFN QLSTGFRLSC FMGTIDVNDY DSKLCLQNKL LSKILNQKDM KIHHLGAIEE 120
121 WLHNQRVLIV LDDVDDLEQL EVLAKESSWF GHGSRIIVSL NDRKILKAHG INDIYDVDFP 180
181 SEEEALEILC LSAFKQNSPQ DGFEEVAKRV VELCGKLPLG LRVVGSSFYG ESEDEWRIQL 240
241 YGIETNLDRK IENVLRVGYD KLSERHQSLF LHIACFFNHK SVDYVTTMLA DSTLDVENGL 300
301 KTLAAKSLVS TNGWITMHCL LQQLGRQVVV QQGDPGKRQF LVEAKEIRDV LANETGTESV 360
361 IGISFDISK
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [528-1104] |
1 11 21 31 41 51
| | | | | |
1 IETLSISKRA FNRMRNLKFL NFYNGSVSLL EDMEYLPRLR LLYWGSYPRK SLPLTFKPEC 60
61 LVELYMGFSK LEKLWGGIQP LTNLKKINLG YSSNLKEIPN LSKATNLKTL TLTGCESLVE 120
121 IPSSIWNLQK LEMLYASGCI KLQVIPTNIN LASLEEVNMS NCSRLRSFPD ISSNIKRLYV 180
181 AGTMIKEFPA SIVGHWCRLD FLQIGSRSLK RLTHVPESVT HLDLRNSDIK MIPDCVIGLP 240
241 HLVSLLVENC TKLVSIQGHS PSLVTLFADH CISLKSVCCS FHGPISKLMF YNCLKLDKES 300
301 KRGIIQQSGN KSICLPGKEI PAEFTHQTIG NLITISLAPG CEEAYSTFSR FKACLLLSPI 360
361 KNFAFNKINC FLRSKGVEIS RTTESIYPFV SGGSLSEHLF IFCGDLFPEE NRSLMDVTPN 420
421 EILFDFSSSD VEIVECGVKI FLSSGIEVGY CETGGNRNHH IDGEAEAFKV TQVENSKHTG 480
481 HWSWLRKLRL GKKKMKNNKT ELSSRPVSGF SDLTRGIFIR YQEPEAVELT KDERITDLSS 540
541 LLCIGSLVVC FFLSVFFGQP LVVSVLLLFS CFFLQMQ
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
