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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15237516, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSSPSDFK RYHVFSSFHG PDVRSGFLSH LHNHFESKGI TPFKDQEIER GHTIGPELIQ  60
   61 AIRESRVSIV VLSEKYASSC WCLDELVEIL KCKEASGQVV MTIFYKVDPS DVRKQRGDFG 120
  121 STFKKTCEGK TWIVKQRWIK ALEYIATVAG EHSLSWANEA ELIQKIATDV SNKLNLTPSR 180
  181 DFEGMVGLEA HLTKLDSFLC LESDDVKMIG IWGPAGIGKT TIARALFNQL STGFRLSCFM 240
  241 GTIDVNDYDS KLCLQNKLLS KILNQKDMKI HHLGAIEEWL HNQRVLIVLD DVDDLEQLEV 300
  301 LAKESSWFGH GSRIIVSLND RKILKAHGIN DIYDVDFPSE EEALEILCLS AFKQNSPQDG 360
  361 FEEVAKRVVE LCGKLPLGLR VVGSSFYGES EDEWRIQLYG IETNLDRKIE NVLRVGYDKL 420
  421 SERHQSLFLH IACFFNHKSV DYVTTMLADS TLDVENGLKT LAAKSLVSTN GWITMHCLLQ 480
  481 QLGRQVVVQQ GDPGKRQFLV EAKEIRDVLA NETGTESVIG ISFDISKIET LSISKRAFNR 540
  541 MRNLKFLNFY NGSVSLLEDM EYLPRLRLLY WGSYPRKSLP LTFKPECLVE LYMGFSKLEK 600
  601 LWGGIQPLTN LKKINLGYSS NLKEIPNLSK ATNLKTLTLT GCESLVEIPS SIWNLQKLEM 660
  661 LYASGCIKLQ VIPTNINLAS LEEVNMSNCS RLRSFPDISS NIKRLYVAGT MIKEFPASIV 720
  721 GHWCRLDFLQ IGSRSLKRLT HVPESVTHLD LRNSDIKMIP DCVIGLPHLV SLLVENCTKL 780
  781 VSIQGHSPSL VTLFADHCIS LKSVCCSFHG PISKLMFYNC LKLDKESKRG IIQQSGNKSI 840
  841 CLPGKEIPAE FTHQTIGNLI TISLAPGCEE AYSTFSRFKA CLLLSPIKNF AFNKINCFLR 900
  901 SKGVEISRTT ESIYPFVSGG SLSEHLFIFC GDLFPEENRS LMDVTPNEIL FDFSSSDVEI 960
  961 VECGVKIFLS SGIEVGYCET GGNRNHHIDG EAEAFKVTQV ENSKHTGHWS WLRKLRLGKK1020
 1021 KMKNNKTELS SRPVSGFSDL TRGIFIRYQE PEAVELTKDE RITDLSSLLC IGSLVVCFFL1080
 1081 SVFFGQPLVV SVLLLFSCFF LQMQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle