YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HSD1B_ARATH, HSD...

General Information:
Name(s) found: HSD1B_ARATH [Swiss-Prot]
HSD1A_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|9758769|dbj|BAB09145.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] [NCBI NR]
  • gi|8777393|dbj|BAA96983.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] [NCBI NR]
  • gi|62320743|dbj|BAD95411.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] [NCBI NR]
  • gi|22327700|ref|NP_680418.1| short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20148649|gb|AAM10215.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] [NCBI NR]
  • gi|18423187|ref|NP_568742.1| AtHSD1 (hydroxysteroid dehydrogenase 1); binding / catalytic/ oxidoreductase [Arabidopsis thaliana] [NCBI NR]
  • gi|17386150|gb|AAL38621.1|AF446888_1 AT5g50700/MFB16_9 [Arabidopsis thaliana] [NCBI NR]
  • gi|17065384|gb|AAL32846.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15450585|gb|AAK96564.1| AT5g50700/MFB16_9 [Arabidopsis thaliana] [NCBI NR]
  • 11-beta-hydroxysteroid dehydrogenase 1B OS=Arabidopsis thaliana GN=HSD1 PE=1 SV=1 [Swiss-Prot]
  • 11-beta-hydroxysteroid dehydrogenase 1A OS=Arabidopsis thaliana GN=HSD1 PE=1 SV=1 [Swiss-Prot]
  • (Q9LUF1) 11-beta-hydroxysteroid dehydrogenase-like (AT5g50700/MFB16_9) [athaliana3702.FASTAC.txt]
  • 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana]gi|8777393|dbj|BAA96983.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana]gi|20148649|gb|AAM10215.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana]gi|173 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Short-chain dehydrogenase/reductase (SDR) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATHSD1 | ATHSD1 (HYDROXYSTEROID DEHYDROGENASE 1); oxidoreductase | chr5:20607143-20608879 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr5:20640485-20642221 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g50700/MFB16_9 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATHSD1, HSD1 | hydroxysteroid dehydrogenase 1 | chr5:20589917-20591653 REVERSE LENGTH=349 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: HSD1 | hydroxysteroid dehydrogenase 1 | chr5:20623259-20624995 REVERSE LENGTH=349 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: response to abscisic acid stimulus [IMP]
    metabolic process [IEA]
    response to brassinosteroid stimulus [IMP]
    Molecular Function: oxidoreductase activity [IEA][ISS]
    catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG  60
   61 EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV TVHADVSKPD DCRRIVDDTI 120
  121 THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV 180
  181 AMSSSAAWLT APRMSFYNAS KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS 240
  241 GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE 300
  301 LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 57.69897 Crystal structure of peroxisomal trans 2-enoyl CoA reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • steroid dehydrogenase activity
    		•  3.70115036051018 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  3.56748749904419 bayes_pls_golite062009
  • retinoid binding
    		•  3.31525332106318 bayes_pls_golite062009
  • isoprenoid binding
    		•  3.1968520076804 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  3.08644105481774 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  2.94416173750168 bayes_pls_golite062009
  • 11-beta-hydroxysteroid dehydrogenase activity
    		•  2.8067651687144 bayes_pls_golite062009
  • structural molecule activity
    		•  2.31813292180084 bayes_pls_golite062009
  • 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
    		•  1.80383455383329 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • DNA binding
    		•  1.76363334651124 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.70071720869899 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.58440778443922 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  1.25716430119828 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • transcription factor activity
    		•  1.00440715995478 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.9367410227151 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.905392379451071 bayes_pls_golite062009
  • electron carrier activity
    		•  0.851536992751213 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.839863523675468 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  0.57130372652719 bayes_pls_golite062009
  • ethanol binding
    		•  0.43110794057174 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity
    		•  0.408483170177369 bayes_pls_golite062009
  • retinol binding
    		•  0.40116957175133 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.331998750763528 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  0.27189038644972 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.261132005311306 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.200409117794759 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0361234153211201 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle