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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HSD1B_ARATH, HSD...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG  60
   61 EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV TVHADVSKPD DCRRIVDDTI 120
  121 THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV 180
  181 AMSSSAAWLT APRMSFYNAS KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS 240
  241 GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE 300
  301 LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle