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Protein Overview: CE33197

General Information:
Name(s) found: CE33197 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00012364 status:Confirmed UniProt:Q23227 protein_id:CAB01669.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 472 amino acids

    Gene Ontology:
    Cellular Component: proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    metal ion binding [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPLFLLGII GVVSAGIPGT NGDIRQPNFQ KELMDEAKVY LFKFGYMIPE PHQNVKTIQE  60
   61 PSEKQTKDAL IRFQSAFLYY SSGDVDVPTQ AKMNEWRCAN NDMDKGQPIP PASKKELWTK 120
  121 KSLTYKVVNT PNTLSQAQIR SAAHEAFEQW TRASGFKFVE TTGATPDITI TFYDVPQSNL 180
  181 RIAGSASKPV NSHIILDKNQ EWAYKSQAPM GISLYHTLLH EIGHILGLPH TFYRGSIMHP 240
  241 IFKPVLLPHG TVDTVPNVDR LAIRKIYGLS SVDHSTPSSD VDRSKCPKHL DSVVAINDQE 300
  301 WLFFRSNKVY KLNNRKFVDS GRPIQQVFPR GPQFVNATVS SGPLTLLFVE RTIYGYEYDG 360
  361 VQFTEAPNYP KELHDRVLFY PQGAFPLNNG SVILLSGNVF ATYNVQQNAP SFLNDKNRYF 420
  421 PNLPEDIKSG IEKTQGFTDA YYMFDEATVS DYDMNSKQVL QLQNIPDFLK CT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..472] PSI-BLAST 106.0 X-ray structure of human proMMP-1: New insights into collagenase action

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.33358263548929 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.99457783001146 bayes_pls_golite062009
  • fibronectin binding
    		•  4.88120744785295 bayes_pls_golite062009
  • endopeptidase activity
    		•  4.16532996235931 bayes_pls_golite062009
  • peptidyl-dipeptidase activity
    		•  4.09850817629179 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.94798058866011 bayes_pls_golite062009
  • hydrolase activity
    		•  3.86424959037326 bayes_pls_golite062009
  • bradykinin receptor binding
    		•  3.75764679027735 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  3.43236442601127 bayes_pls_golite062009
  • exopeptidase activity
    		•  2.07461908743946 bayes_pls_golite062009
  • receptor binding
    		•  2.07222569254168 bayes_pls_golite062009
  • low-density lipoprotein receptor binding
    		•  1.8532193155997 bayes_pls_golite062009
  • protein complex binding
    		•  1.73407494465529 bayes_pls_golite062009
  • lipoprotein receptor binding
    		•  1.70122256659368 bayes_pls_golite062009
  • integrin binding
    		•  1.58328929324965 bayes_pls_golite062009
  • protein binding
    		•  1.58118182554863 bayes_pls_golite062009
  • binding
    		•  1.55761777216628 bayes_pls_golite062009
  • growth factor activity
    		•  1.45186436100051 bayes_pls_golite062009
  • transporter activity
    		•  1.28982382930122 bayes_pls_golite062009
  • G-protein-coupled receptor binding
    		•  1.28944451245801 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.0688261398267 bayes_pls_golite062009
  • catalytic activity
    		•  0.891187593353827 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.798767221679673 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.543737159152136 bayes_pls_golite062009
  • zinc ion binding
    		•  0.49304764842799 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.393080846858665 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.374597710524442 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  0.252655558968584 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.241890854867053 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.21808506596674 bayes_pls_golite062009
  • signal transducer activity
    		•  0.120905338073793 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.120905338073793 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.0527296790035641 bayes_pls_golite062009
  • cytokine receptor binding
    		•  0.0255053415182105 bayes_pls_golite062009
  • heparin binding
    		•  0.0209467326072597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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