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Protein Overview: tufm-2

General Information:
Name(s) found: tufm-2 / CE32610 [WormBase]
Description(s) found:
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  • WBGene00007001 locus:tufm-2 status:Confirmed UniProt:G5EDF5 protein_id:CCD65152.1 [WormBase]
  • pir||T37273 probable translation elongation factor EF-Tu, mitochondrial - Caenorhabditis elegans [NCBI NR]
  • gi|3298089|dbj|BAA31345.1| mitochondrial elongation factor Tu homologue [Caenorhabditis elegans] [NCBI NR]
  • gi|26251628|gb|AAN84843.1| Tu elongation factor (ef-tu), mitochondrial protein 2 [Caenorhabditis elegans] [NCBI NR]
  • gi|25141371|ref|NP_491338.2| TU elongation Factor (EF-Tu), Mitochondrial family member (tufm-2) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32610 WBGene00007001 elongation factor Tu status:Confirmed TR:P91150 protein_id:AAN84843.1 [wormpep150.fasta]
  • 32610 WBGene00007001 elongation factor Tu status:Confirmed TR:P91150 protein_id:AAN84843.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • mitochondrial elongation factor Tu homolog (47.8 kD) (1E817) [Caenorhabditis elegans]gi|26251628|gb|AAN84843.1| Hypothetical protein C43E11.4 [Caenorhabditis elegans]gi|7443404|pir||T37273 probable translation elongation factor EF-Tu, mitochondrial - Ca [nrdb_11152004_Chlamydomonas]
  • locus:EF-Tu2 elongation factor Tu status:Confirmed TR:P91150 protein_id:AAN84843.1 [wormpep115.fasta.reversed]
  • CE32610 WBGene00007001 locus:tufm-2 elongation factor Tu status:Confirmed UniProt:P91150_CAEEL protein_id:AAN84843.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32610 WBGene00007001 locus:tufm-2 elongation factor Tu status:Confirmed UniProt:P91150_CAEEL protein_id:AAN84843.1| [wormORF-contam.fasta]
  • CE32610 WBGene00007001 locus:tufm-2 elongation factor Tu status:Confirmed TR:P91150 protein_id:AAN84843.1 [wormpep160-contam.fasta]
  • mitochondrial elongation factor Tu homologue [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • TU elongation Factor (EF-Tu), Mitochondrial family member (tufm-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C43E11.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32610 WBGene00007001 locus:tufm-2 elongation factor Tu status:Confirmed UniProt:P91150 protein_id:AAN84843.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32610 WBGene00007001 locus:tufm-2 elongation factor Tu status:Confirmed UniProt:G5EDF5 protein_id:CCD65152.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32610 WBGene00007001 locus:tufm-2 status:Confirmed UniProt:G5EDF5 protein_id:CCD65152.1 [wormpep246-ecoli-contam.fasta]
  • Mitochondrial elongation factor Tu homologue OS=Caenorhabditis elegans GN=tufm-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: selenocysteine incorporation [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    translational elongation [IEALink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    translation elongation factor activity [IEALink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    transferase activity, transferring phosphorus-containing groups [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPAALSAFT RSLLFNRCST SSFCNSITRN AVAFFATAAA TPKINVNVGT IGHIDHGKTT  60
   61 LTSAITRVQA KKGFAKHIKF DEIDKGKEEK KRGITINVAH IGYESPLRRY SHTDCPGHSD 120
  121 FIKNMICGTS QMDVAVLVIA ATDGVMEQTK EHLILAKQVG VKNMAIFINK ADLVEEDDLD 180
  181 LVEMEARELL SLHGFNGDAT PVIRGSALSA LEGQDISCIE RLIDALDSLP EPDRNEKDTF 240
  241 VMPIASKTAI TGRGTVIVGT LERGVLKKGD KVEIKGDGQT LQTTASDIQV FGKSVKEVRA 300
  301 GDHCGVLCRG VKGDTVKRGM WAGHPGAVTI TNRVKVELYL LSEAENGRKI GIRTGFTDKM 360
  361 YCSTWDQVGR FDMSNELLMP GEHTSATVLL MKDMPLRKGM PFTLREGSSK TTIARGIISD 420
  421 LEDHVAVEKH NLKKSAEKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..439] PSI-BLAST 112.0 Elongation factor Tu (EF-Tu), domain 2; Elongation factor Tu (EF-Tu); Elongation factor Tu (EF-Tu), N-terminal (G) domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation elongation factor activity
    		•  8.90683166637832 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.8378725567094 bayes_pls_golite062009
  • translation regulator activity
    		•  4.79814772079421 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  4.56509805974548 bayes_pls_golite062009
  • structural molecule activity
    		•  3.58406348799895 bayes_pls_golite062009
  • transporter activity
    		•  3.10463051760206 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.95886887664984 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.95079405147356 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.87427509025394 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.85499564954033 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.85178667290149 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  2.50494515048649 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  2.39629638016861 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  2.39600931083427 bayes_pls_golite062009
  • ATPase activity
    		•  2.39535714892224 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  2.36051733655256 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  2.35906629925754 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  2.35679406876731 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.24901251684901 bayes_pls_golite062009
  • actin filament binding
    		•  2.1683792904715 bayes_pls_golite062009
  • motor activity
    		•  2.11140484670646 bayes_pls_golite062009
  • binding
    		•  2.01755875920323 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.65609907941094 bayes_pls_golite062009
  • hydrolase activity
    		•  1.57549510726226 bayes_pls_golite062009
  • actin binding
    		•  1.42666717383185 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.40488517180956 bayes_pls_golite062009
  • microfilament motor activity
    		•  1.33993901826495 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.3182108176243 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.929901285538132 bayes_pls_golite062009
  • nucleotide binding
    		•  0.922442819194247 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.920987930180051 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.920926158369519 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.913322399315129 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.76547843267689 bayes_pls_golite062009
  • peptidyltransferase activity
    		•  0.705667095586631 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.704934361725919 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.60036517876321 bayes_pls_golite062009
  • GTPase activity
    		•  0.437665353870877 bayes_pls_golite062009
  • ATP binding
    		•  0.41092997612902 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.385813421701492 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.377870145186619 bayes_pls_golite062009
  • DNA binding
    		•  0.376487324624615 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.296406132096546 bayes_pls_golite062009
  • GTP binding
    		•  0.295705904888768 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.29028316917561 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.282397764628576 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.150159515184919 bayes_pls_golite062009
  • protein binding
    		•  0.071010918255742 bayes_pls_golite062009
  • RNA binding
    		•  0.0693163519626152 bayes_pls_golite062009
  • helicase activity
    		•  0.0450969969658499 bayes_pls_golite062009
  • protein transporter activity
    		•  0.0397092337273124 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  0.0378638259240902 bayes_pls_golite062009
  • signal sequence binding
    		•  6.53725193420218E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle