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Protein Overview: cog3

General Information:
Name(s) found: cog3 / SPBC1539.05 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • Golgi transport complex subunit Cog3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 735 amino acids

    Gene Ontology:
    Cellular Component: Golgi transport complex [ISSLink to PubMed article]
    cis-Golgi network [IEA]
    cell division site [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    membrane [IEA]
    Biological Process: intra-Golgi vesicle-mediated transport [ISSLink to PubMed article]
    intracellular protein transport [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDQLEFYPA VNYEDNETQN DIKLPEVAKL ENIETVHSIS KERRDSLTEI LNDSSSLPAR  60
   61 PFSLPNPNNS TVEKQSLFPF EEKMNPIWII SRPTFSIEQD AEKKINELQT FTNIIDQILG 120
  121 QTNNIESTLL SMKEKFESSE KKLSEFSEMC ENLSTDEMRF SEIADGIRKG LTIFAPLKEL 180
  181 TRVFRHPPPD FAGKVSFKEH ITQLNTCIMF LEENLDFQES PHYLGQYKKL LSQAMDIFKP 240
  241 YFIRIIKQTT DQVLKDSKKM DVHKQLHSSL FYARFSAVGH NLCPTITELC KLCSKESLDA 300
  301 FLPAFYDVYF QCRTRLLKPV LDYHLKSFFM EKSISSYIQK SLALLQLTFF DENKLFREIL 360
  361 IMDDFRFMHY WNNLCQSFFE NSRSLILHEK NLTELCEVCS YIQSFQNAIL EGEREDVDKK 420
  421 VVEFLNPLVL ELQERLLFVV QTAIETDIQR YSPTEEDLNP IADDKSLLFD LEKLRLNNDE 480
  481 EKLDPDVPQK LAMAQGWYPV VQKSLIILSK IYRLVNSQVF DEIALELVHS CIRSLVDAYR 540
  541 YFSRNNDKQL ARLFLIKNFL VLKDQLNSFD IHYACIEAGV DLRKVWDSVR EWRSNLRGVL 600
  601 QLVYETFPKF ITNAVDTRQE LNQQLRVAVN GYIETAVIHY TECLSIGNLE SITEFQNRIQ 660
  661 KFPELRQQIS LYLSETWIIE LFLQAIREEV VSKFQNFYES IVANEDITGS DHNKSGTTSL 720
  721 KHLNEYVEDI YSVMS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 4.522879 Crystal Structure Analysis of ClpB
    2 View Details [215..735] FFAS03 1.23 Crystal Structure of the S. cerevisiae Exocyst Component Exo70p

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  2.95079405147356 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.87427509025394 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.85499564954033 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.85178667290149 bayes_pls_golite062009
  • transporter activity
    		•  2.58140740499725 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.39695871109024 bayes_pls_golite062009
  • ATPase activity
    		•  2.39535714892224 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.18396165590908 bayes_pls_golite062009
  • binding
    		•  1.76582493975071 bayes_pls_golite062009
  • hydrolase activity
    		•  1.57549510726226 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.29730375126024 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.929901285538132 bayes_pls_golite062009
  • nucleotide binding
    		•  0.922442819194247 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.920987930180051 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.920926158369519 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.906554174337376 bayes_pls_golite062009
  • motor activity
    		•  0.87979065815418 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.640772201693186 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.63468044350616 bayes_pls_golite062009
  • GTP binding
    		•  0.621689261700018 bayes_pls_golite062009
  • protein binding
    		•  0.569246647740442 bayes_pls_golite062009
  • protein transporter activity
    		•  0.498432226280822 bayes_pls_golite062009
  • catalytic activity
    		•  0.458437698837681 bayes_pls_golite062009
  • GTPase activity
    		•  0.437665353870877 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.434775387083003 bayes_pls_golite062009
  • ATP binding
    		•  0.41092997612902 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.385813421701492 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.377870145186619 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.355466224802969 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.294474570607914 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.282352478532746 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.220608508617331 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.219533217661421 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.219157471322311 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0254369227200564 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle