| Protein: | cog3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cog3.
| Description | E-value | Query Range |
Subject Range |
|
|
664.0 | [0..11] | [728..23] |
|
|
661.0 | [0..12] | [729..30] |
|
|
661.0 | [0..13] | [728..33] |
|
|
652.0 | [0..13] | [728..33] |
|
|
650.0 | [0..13] | [728..33] |
|
|
647.0 | [0..2] | [728..21] |
|
Region A: Residues: [1-214] |
1 11 21 31 41 51
| | | | | |
1 MFDQLEFYPA VNYEDNETQN DIKLPEVAKL ENIETVHSIS KERRDSLTEI LNDSSSLPAR 60
61 PFSLPNPNNS TVEKQSLFPF EEKMNPIWII SRPTFSIEQD AEKKINELQT FTNIIDQILG 120
121 QTNNIESTLL SMKEKFESSE KKLSEFSEMC ENLSTDEMRF SEIADGIRKG LTIFAPLKEL 180
181 TRVFRHPPPD FAGKVSFKEH ITQLNTCIMF LEEN
|
| Detection Method: |  |
| Confidence: | 4.522879 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
| binding | 1.76582493975071 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
| motor activity | 0.87979065815418 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.640772201693186 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.63468044350616 | bayes_pls_golite062009 |
| GTP binding | 0.621689261700018 | bayes_pls_golite062009 |
| protein binding | 0.569246647740442 | bayes_pls_golite062009 |
| protein transporter activity | 0.498432226280822 | bayes_pls_golite062009 |
| catalytic activity | 0.458437698837681 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
|
Region A: Residues: [215-735] |
1 11 21 31 41 51
| | | | | |
1 LDFQESPHYL GQYKKLLSQA MDIFKPYFIR IIKQTTDQVL KDSKKMDVHK QLHSSLFYAR 60
61 FSAVGHNLCP TITELCKLCS KESLDAFLPA FYDVYFQCRT RLLKPVLDYH LKSFFMEKSI 120
121 SSYIQKSLAL LQLTFFDENK LFREILIMDD FRFMHYWNNL CQSFFENSRS LILHEKNLTE 180
181 LCEVCSYIQS FQNAILEGER EDVDKKVVEF LNPLVLELQE RLLFVVQTAI ETDIQRYSPT 240
241 EEDLNPIADD KSLLFDLEKL RLNNDEEKLD PDVPQKLAMA QGWYPVVQKS LIILSKIYRL 300
301 VNSQVFDEIA LELVHSCIRS LVDAYRYFSR NNDKQLARLF LIKNFLVLKD QLNSFDIHYA 360
361 CIEAGVDLRK VWDSVREWRS NLRGVLQLVY ETFPKFITNA VDTRQELNQQ LRVAVNGYIE 420
421 TAVIHYTECL SIGNLESITE FQNRIQKFPE LRQQISLYLS ETWIIELFLQ AIREEVVSKF 480
481 QNFYESIVAN EDITGSDHNK SGTTSLKHLN EYVEDIYSVM S
|
| Detection Method: | |
| Confidence: | 1.23 |
| Match: | 2b7mA |
| Description: | Crystal Structure of the S. cerevisiae Exocyst Component Exo70p |
Matching Structure (courtesy of the PDB): |
|
