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Protein Overview: fft2

General Information:
Name(s) found: fft2 / SPCC1235.05c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • fun thirty related protein Fft2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1284 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article][IDALink to PubMed article]
    nuclear chromatin [NAS]
    cytosol [IDALink to PubMed article]
    chromatin remodeling complex [NASLink to PubMed article]
    Biological Process: chromatin remodeling [NASLink to PubMed article]
    chromosome organization [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    DNA binding [IEA]
    ATP-dependent DNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPYNSNYLS DNGKRKFSDE NPQSEVYGSS QTGLPSSYGN PQSYGTPPVQ QSSAMYGVNN  60
   61 SMGGGMYNTS ENTQFMNTDY SQTSSYASTP MSNAYSRDAP AAINNNFGYS YVGQSSQPVP 120
  121 SYNPLPSYNT ASLPNAGIPA AMPGMPSGYP GTVPIPQGGY NAHYSSPYNN GYPIGAVNPT 180
  181 SAIPAQPPAQ PVNNVLPSYV RSNSRSSARS TARSAPRSTQ RSRSSSANPV TTPPVNNTLL 240
  241 TPPAPPVELP PVTTTSPNAI IRSVQWIRSF VPQAPIHQVI NTLAQTKWDE TAALSILSQK 300
  301 YLSCDLGIPI QEHKRFKQSP VASNMPTYGS SNRTVQSQKR SIRDKYIQMP NDSTQASLMP 360
  361 SYTRKTSNAS KKLTTEEDEF YDSEEEPEAI VHRDTSALER TVLNFINSST AKELSDTASC 420
  421 PLSHSKLLLE HRPFQTLAEA CIIKHPDDVP SKPGRRGRRR EKNPMGQKIV NACMETMEGY 480
  481 YAIDNLIAKC EFLGNRISKG MASWGIKLEM SNGELNIVDM ESVPTEAADN SDFPKFVTEQ 540
  541 PKTLASDVQL KSYQLVGVNW LHLLYQQKLS GILADEMGLG KTCQVVAFFA LLLEQGHHGP 600
  601 HLVVVPSSTL ENWLRELARF CPSLRVEPYY GSQQERANIR EAIEENEIKY DILVTTYQLA 660
  661 TNNKEDRSFL KHQNFDVCVY DEGHYLKNRM SERYKHLMNL NANFRLLLTG TPLQNNLKEL 720
  721 VSLLAFILPN MFDSDMDDLD VIFKAKPTAD ADIEQALLSK QRISRAKTMM TPFVLRRRKN 780
  781 QVLNDLPKKT QIIEHCKLSE NQLEIYNRYA ALQKNQQLRR DDKRNKRSKN DEESDGKSLS 840
  841 AGHVLMQLRK AANHALLFRK FYDDEKLKQM AKDIMQEEQY KNANEQYIYE DMEVMSDFEL 900
  901 HRLCRSFPTL QSYTLKDDPW MDSGKIRVLK ELLPKMKEEG SRILLFSQFT QMLDILEQVL 960
  961 DTLKISYVRL DGSTQVEVRQ DIIDQFHKEE DVTVFLLSTK AGGFGINLAC ANVVILYDCS1020
 1021 YNPFDDLQAE DRAHRVGQVR EVTVIRLITD NTIEEYIQKL ANTKLALDMS LSSDGKDREE1080
 1081 IGERLVQDML DEENNGNNTK PEITGNESDG EFKVSSSNNS KQTDAEETNT GVPLEGSQPN1140
 1141 SVEKTDLADG DEKANIKTEM KSETVEGDNK ELRETMKGEN VQTDSNAAVP SSKSSTEEPN1200
 1201 ESVLSGHLDL DTEASPVVST IEKTTKGDVS VTEEQQSANI DGQLEKPEIE ESKKPDVLNQ1260
 1261 VSLSIEEEKP KNKESEVDNN AAKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 4.221849 Sec24
    2 View Details [277..349] deduced N/A No confident structure predictions are available.
    3 View Details [350..508] FFAS03 2.41 Architecture of the photosynthetic oxygen evolving center
    4 View Details [509..1105] PSI-BLAST 125.0 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54
    5 View Details [1106..1163] PSI-BLAST 7.39794 Crystal structure of Escherichia coli transcription-repair coupling factor
    6 View Details [1164..1284] PSI-BLAST 7.0 nucleosome recognition module of ISWI ATPase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • DNA-dependent ATPase activity
    		•  2.72462789867829 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.69246499202248 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  2.66107861968804 bayes_pls_golite062009
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.61582393123755 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.59641929642359 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.59333672868803 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.51683451033161 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.2817164193758 bayes_pls_golite062009
  • transporter activity
    		•  2.17383908004663 bayes_pls_golite062009
  • DNA binding
    		•  2.12258000781149 bayes_pls_golite062009
  • ATPase activity
    		•  2.11122403732968 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.09345198747025 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.02444700826552 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.8908019270286 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  1.88455339138556 bayes_pls_golite062009
  • helicase activity
    		•  1.70242731830224 bayes_pls_golite062009
  • microtubule motor activity
    		•  1.6537049553461 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  1.53262078944357 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  1.53262078944357 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  1.47858140861683 bayes_pls_golite062009
  • hydrolase activity
    		•  1.35268825531078 bayes_pls_golite062009
  • motor activity
    		•  1.34881124154297 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
    		•  1.29640539057136 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.2539059700735 bayes_pls_golite062009
  • protein binding
    		•  1.22129154759482 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  1.19311444180077 bayes_pls_golite062009
  • DNA clamp loader activity
    		•  1.12431517057397 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  1.117585097627 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.97700154207756 bayes_pls_golite062009
  • transcription factor activity
    		•  0.887108427603557 bayes_pls_golite062009
  • structural molecule activity
    		•  0.86514677273731 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.862685397469217 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.725611289205392 bayes_pls_golite062009
  • nucleotide binding
    		•  0.717697610309727 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.713814218071151 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.713752628021599 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.608058786636536 bayes_pls_golite062009
  • ATP binding
    		•  0.60527666756293 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.573214556107072 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.568457189190858 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.554530910579109 bayes_pls_golite062009
  • transcription activator activity
    		•  0.537911793669378 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.500462538667228 bayes_pls_golite062009
  • GTPase activity
    		•  0.437665353870877 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  0.324427816547256 bayes_pls_golite062009
  • mismatched DNA binding
    		•  0.31144582840038 bayes_pls_golite062009
  • translation regulator activity
    		•  0.29096092258568 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.274994961137851 bayes_pls_golite062009
  • four-way junction helicase activity
    		•  0.26252931460003 bayes_pls_golite062009
  • exodeoxyribonuclease V activity
    		•  0.185603938981231 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.18426050934025 bayes_pls_golite062009
  • kinase activity
    		•  0.163756462988596 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.14606996093053 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  0.13050483816765 bayes_pls_golite062009
  • centromeric DNA binding
    		•  0.120185906020979 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.117412028365885 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.114463153989353 bayes_pls_golite062009
  • microfilament motor activity
    		•  0.10236059675512 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.081265446432119 bayes_pls_golite062009
  • 3'-5' DNA helicase activity
    		•  0.0769112340058804 bayes_pls_golite062009
  • protein transporter activity
    		•  0.0397092337273124 bayes_pls_golite062009
  • actin binding
    		•  0.00482938540552702 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle