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Protein Overview: SPCC965.06

General Information:
Name(s) found: SPCC965.06 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • potassium channel subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    integral to membrane [IEA]
    cytosol [IDALink to PubMed article]
    Biological Process: potassium ion transport [IEA]
    transmembrane transport [IEA]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: potassium ion binding [IEA]
    oxidoreductase activity [RCALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATTHFQP KNVPFRFLGR SGLKVSAFSL GGWLTYGNEG YDVEHTKNCL KQAWDLGINT  60
   61 FDTAEIYSNG NSETVMGKAI KELGWDRSEY VITTKVFFGA GTKLPNTTGL SRKHIIEGLN 120
  121 ASLKRLGLPY VDVIMAHRPD PSVPMEEVVR AFTQLIQDGK AFYWGTSEWS AFEIEHAHHI 180
  181 ATKYNLIAPV ADQPQYNYLT RDHFEKDLLP LQQIYGYGAT VWSPLKSGIL TGKYNDGIPE 240
  241 GSRLSTTFTS LAGQLQTPEG KTQLDQVRQI SKIAEQIGAT PSQLALAWTL KNPYVSTTIL 300
  301 GASKPEQIVE NVKAVEFIDK LTPEILKKID EILNFTPLEI QYRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 78.69897 Voltage-dependent K+ channel beta subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • potassium channel activity
    		•  7.51963276589303 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  7.40239094355354 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  6.67507110634301 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  6.588881463055 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  6.52286930358188 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  6.50716590143831 bayes_pls_golite062009
  • cation channel activity
    		•  5.72172645555113 bayes_pls_golite062009
  • ion channel activity
    		•  5.15119282480682 bayes_pls_golite062009
  • channel activity
    		•  5.07214658557001 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  5.07214658557001 bayes_pls_golite062009
  • aldehyde reductase activity
    		•  5.07106269693426 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  5.02503292701043 bayes_pls_golite062009
  • gated channel activity
    		•  4.92848832197692 bayes_pls_golite062009
  • arabinose reductase activity
    		•  3.28910924444005 bayes_pls_golite062009
  • xylose reductase activity
    		•  3.28910924444005 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.72342789448248 bayes_pls_golite062009
  • glucose 1-dehydrogenase (NADP+) activity
    		•  2.68048267823456 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.63772951680109 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  2.62743427046359 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.58068601897668 bayes_pls_golite062009
  • aldo-keto reductase activity
    		•  2.57303336304449 bayes_pls_golite062009
  • aryl-alcohol dehydrogenase activity
    		•  2.5168190536972 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.46488926936937 bayes_pls_golite062009
  • catalytic activity
    		•  1.68179794468736 bayes_pls_golite062009
  • glucose 1-dehydrogenase activity
    		•  1.55697325009049 bayes_pls_golite062009
  • transporter activity
    		•  1.24767072239634 bayes_pls_golite062009
  • binding
    		•  1.15657176144267 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.03420335553507 bayes_pls_golite062009
  • potassium channel regulator activity
    		•  1.03017249802223 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.91523123890256 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.783004917746429 bayes_pls_golite062009
  • protein binding
    		•  0.220529867719707 bayes_pls_golite062009
  • 3-alpha-hydroxysteroid dehydrogenase (B-specific) activity
    		•  0.207008954325429 bayes_pls_golite062009
  • trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
    		•  0.207008954325429 bayes_pls_golite062009
    		• 0.139676323362391 bayes_pls_golite062009
  • channel regulator activity
    		•  0.12154513851913 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle