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Protein Overview: SPBC725.04

General Information:
Name(s) found: SPBC725.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • oxalyl-CoA decarboxylase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: magnesium ion binding [IEA]
    thiamin pyrophosphate binding [IEA]
    lyase activity [IEA]
    carboxy-lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISFSELVA KTLLDLEVKV VFGIVGIPVI EICEAIQASG IRFVGFRNEQ SAAYAATAYG  60
   61 YLTQRPGVCV VVGGPGVVHA MAGVFNSKTN RWPLLLLAGS SETFQQNCGA FQELDQVSYL 120
  121 SPHTKLAVRP PSPKMVVDSI RRAYRVSMTG TPGTCYVDLP ANYIESTVDD FPKDPLPPIP 180
  181 SSPKCAPDPT QLQKAAYYLK NAKAPLLVVG KGAAYACAEK QLLEFVEHTG IPFLPSPMGK 240
  241 GLLPESHPLN VSSARSAALR NADVVLLAGA RLNWIFQYGL PPKWSPNAKF IQIDTNAETL 300
  301 GNNAADLDLA IWADVGLTID CLFKLVQTWK YSVGISTPYL RTLNETRSKN EKKALESRKS 360
  361 SIPLQMNYAL YVVNEELQSL SLKSKRNITW VSEGANTMDR GRQLLEVTHP RGRLDAGTMS 420
  421 TMGVGMGYAI ASAFAHSSDK IVVVEGDSAF GFSAMELETA IRNQLDLLVI VINNNGVYHG 480
  481 LDTDAYETLR DNHQLPTTAL GTSIRYDQIC EACGGKGFFV KNEEDLRSSL RKAWQTSSVS 540
  541 LINVMVDPEA ARKLTFAWMS STKVKPKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..568] PSI-BLAST 91.69897 CRYSTAL STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH THE COFACTOR DERIVATIVE THIAMIN-2-THIAZOLONE DIPHOSPHATE AND ADENOSINE DIPHOSPHATE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acetolactate synthase activity
    		•  12.903449876837 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  12.3239025230705 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  5.28857071459273 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  5.21233670052586 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  5.08663245333808 bayes_pls_golite062009
  • catalytic activity
    		•  2.25537597692103 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  2.15444163802756 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.98546381612935 bayes_pls_golite062009
  • thiamin pyrophosphate binding
    		•  1.87247313698582 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.85833680148029 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.82969293063325 bayes_pls_golite062009
  • transketolase activity
    		•  1.70348931648612 bayes_pls_golite062009
  • deoxyhypusine synthase activity
    		•  1.46517585302326 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.0611726850452 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.982646671777 bayes_pls_golite062009
  • protein deacetylase activity
    		•  0.882978552120903 bayes_pls_golite062009
  • histone deacetylase activity
    		•  0.881399086357632 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.78591260444574 bayes_pls_golite062009
  • hydrolase activity
    		•  0.536729211484905 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.51426028502998 bayes_pls_golite062009
  • transferase activity
    		•  0.413024577830522 bayes_pls_golite062009
  • NAD-dependent protein deacetylase activity
    		•  0.38348854354211 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  0.38348854354211 bayes_pls_golite062009
  • deacetylase activity
    		•  0.382228826641711 bayes_pls_golite062009
  • binding
    		•  0.313299160093284 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.217707914161459 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0424046736878951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle