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Protein Overview: rfp1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..163] deduced N/A No confident structure predictions are available.
2 View Details [164..254] FFAS03 2.02 brca1 RING domain

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 9.85513873918659 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 9.6498820226444 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 8.65014213775678 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 7.41958646938187 bayes_pls_golite062009
  • ligase activity
  • 3.71574519150582 bayes_pls_golite062009
  • binding
  • 2.70912934275371 bayes_pls_golite062009
  • transcription regulator activity
  • 1.9010236336815 bayes_pls_golite062009
  • nucleic acid binding
  • 1.64351954613384 bayes_pls_golite062009
  • protein binding
  • 1.48593945455888 bayes_pls_golite062009
  • DNA binding
  • 1.37350981563815 bayes_pls_golite062009
  • NEDD8 ligase activity
  • 1.35297260222963 bayes_pls_golite062009
  • transcription repressor activity
  • 1.33893730503955 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 1.02238152139385 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 0.821040441472875 bayes_pls_golite062009
  • transcription factor binding
  • 0.742650421609881 bayes_pls_golite062009
  • transcription factor activity
  • 0.68618471403445 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 0.356312424125648 bayes_pls_golite062009
  • catalytic activity
  • 0.168711389690753 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 0.0136579100966835 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle