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Protein Overview: oct1

General Information:
Name(s) found: oct1 / SPAC1F3.10c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • mitochondrial intermediate peptidase Oct1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 762 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: cellular iron ion homeostasis [ISSLink to PubMed article]
    protein processing involved in protein targeting to mitochondrion [ISSLink to PubMed article]
    proteolysis [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    metalloendopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVRTLLTLG KKKVIGNRQC ILSLYRKYSN VQSRKAEDQL LRQIFDDQNI AVNQITKRNG  60
   61 IQGVGLFRNH FLSDKDTGFL RLAETASEKC KAVIEDLLLE DTEDGSIVVS KFDRISNLLC 120
  121 SVIDLFEFVR CAHPDKMVVM KAEEAYSYLF ELMNTLNTHQ GLYEKLKCSL QQTPTLKDTD 180
  181 PEAYTVGRVF LQDFEKSGVN LESSKRNSFV KKSSESATLG RAFFNNSMNR PQRYLTISKQ 240
  241 RLAGSDPYFV RSLSKNDKNF IMIPTVGYEG TQALISVANP DVRKEIYMEG HKGTVEEVEL 300
  301 LNSYLRSKAE VAKLVGKSSF ADLQLIDKMA NAPKHVVEFL ENLSLKNSSV LKKILNNLAL 360
  361 MKKKELNLNF LPSFDVWDRE YYTARYKQSL INQKPSLNPS ITNYRRFFSV GTVIQGLSRL 420
  421 FSSLYGLRFV PADISPGEVW HPDVNKVNVY NENDHVMGVI YFDLFARTGK TDGAAHFTIR 480
  481 SSRELDLTSF DDSISLGFDD ATNIRVKDNK RYQIPVISLL CNFVRSSGMD PTFLDLWDVK 540
  541 TLFHEMGHAM HSILGHTKYQ NLAGTRCATD FVELPSIIME FFMSNPAVLP LYARYEGTEI 600
  601 PLPVQVLNHH NMVENSSAPL DLQSQICMAM VDQLFHSKVV LDPSFNSIDE VTNVTRKFSG 660
  661 FESAPPAAWY LQFSHLYGYS ATYYSYIFDT VLASLIFSKL FAGNPLSREA GEKFRKAILR 720
  721 WGGSRSPWEC VAEALEQPIL ATGGEEAMRR IGSEGIKATS TF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..762] PSI-BLAST 155.0 Neurolysin (endopeptidase 24.16)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  3.61797750040144 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.50779710207955 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  3.48758651243973 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.33212790314223 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.28672457209168 bayes_pls_golite062009
  • hydrolase activity
    		•  2.4180994157249 bayes_pls_golite062009
  • transporter activity
    		•  1.72601293225401 bayes_pls_golite062009
  • binding
    		•  1.55761777216628 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.40574642512021 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.38438013458016 bayes_pls_golite062009
  • ion binding
    		•  1.04016734747204 bayes_pls_golite062009
  • cation binding
    		•  0.956500682358628 bayes_pls_golite062009
  • metal ion binding
    		•  0.956500682358628 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.933447696036882 bayes_pls_golite062009
  • catalytic activity
    		•  0.891187593353827 bayes_pls_golite062009
  • bradykinin receptor binding
    		•  0.885174712362249 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.655915544358586 bayes_pls_golite062009
  • protein binding
    		•  0.530727556830171 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.414956359430633 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.364756038518376 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.21808506596674 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle