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Protein Overview: exo1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..385] PSI-BLAST 73.69897 Crystal structure of the human FEN1-PCNA complex
2 View Details [386..571] PSI-BLAST 45.0 STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • single-stranded DNA specific 3'-5' exodeoxyribonuclease activity
  • 4.19173394038227 bayes_pls_golite062009
  • flap endonuclease activity
  • 4.10438637013244 bayes_pls_golite062009
  • exonuclease activity
  • 3.55065728618765 bayes_pls_golite062009
  • endonuclease activity
  • 3.40075034200919 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 3.29138075959109 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 3.25110450559975 bayes_pls_golite062009
  • 5'-3' exonuclease activity
  • 3.19536858640519 bayes_pls_golite062009
  • hydrolase activity
  • 2.92353053808585 bayes_pls_golite062009
  • nuclease activity
  • 2.50181033811809 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 2.45364009363271 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 2.3324415860722 bayes_pls_golite062009
  • 5'-3' exodeoxyribonuclease activity
  • 2.26658239783943 bayes_pls_golite062009
  • double-stranded DNA specific exodeoxyribonuclease activity
  • 2.09057967200253 bayes_pls_golite062009
  • exodeoxyribonuclease activity
  • 2.0005433655378 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 1.9833086883205 bayes_pls_golite062009
  • binding
  • 1.86985246794396 bayes_pls_golite062009
  • 5'-flap endonuclease activity
  • 1.81850767854435 bayes_pls_golite062009
  • DNA binding
  • 1.67328600485167 bayes_pls_golite062009
  • nucleic acid binding
  • 1.61574912542722 bayes_pls_golite062009
  • single-stranded DNA specific exodeoxyribonuclease activity
  • 1.61167902830399 bayes_pls_golite062009
  • damaged DNA binding
  • 1.42836853175021 bayes_pls_golite062009
  • catalytic activity
  • 1.37534898662234 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.16717206930423 bayes_pls_golite062009
  • single-stranded DNA specific 5'-3' exodeoxyribonuclease activity
  • 1.15948049342759 bayes_pls_golite062009
  • single-stranded DNA specific endodeoxyribonuclease activity
  • 1.10463550341524 bayes_pls_golite062009
  • endodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 0.901965019685213 bayes_pls_golite062009
  • protein binding
  • 0.389020243587168 bayes_pls_golite062009
  • ribonuclease activity
  • 0.198926730726347 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.176453677293411 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.0978227645302046 bayes_pls_golite062009
  • 3'-5'-exodeoxyribonuclease activity
  • 0.0205129272358 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle