General Information: |
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Name(s) found: |
pcm-PA /
FBpp0074553
[FlyBase]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Drosophila melanogaster |
Length: | 1612 amino acids |
Gene Ontology: |
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Cellular Component: |
cytoplasm
[NAS]
cytoplasmic mRNA processing body [IDA] |
Biological Process: |
dorsal closure
[IMP]
wound healing [IMP] imaginal disc fusion, thorax closure [IMP] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IMP] spermatogenesis [IMP] imaginal disc-derived wing morphogenesis [IMP] nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' [IMP] nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [IEA] RNA interference [IMP] RNA catabolic process [NAS] gastrulation [NAS] |
Molecular Function: |
nucleic acid binding
[IEA]
5'-3' exoribonuclease activity [IDA][ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MGVPKFFRYI SERYPCLSEL AREHCIPEFD NLYLDMNGIV HNCSHPDDNN IHFHLEEEQI 60 61 FQEIFNYVDK LFYLIKPQRL FFLSVDGVAP RAKMNQQRSR RFRTAREAEQ QEAKAAQRGE 120 121 LREHERFDSN CITPGTEFMV RLQEGLRAFL KTKISTDPLW QRCTVILSGQ EAPGEGEHKI 180 181 MDYIRYMKTQ PDYDPNTRHC LYGLDADLII LGLCTHELHF VVLREEVKFG RNVKRTSVEE 240 241 TRFFLLHLGL LREYLELEFD ALRTDEHKLD IAQLIDDWVL MGFLVGNDFI PHLPCLHISS 300 301 NALPLLYRTY IGIYPTLGGN INENGKLNLR RLQIFISALT EVELDHFKEH ADDLKYMNNK 360 361 SEAFDMDVGE ITESQNLDSD LGALINKSML LYDDDSEEDC SDENAVLLKE FQNYKRNFYR 420 421 NKFKRDPNDE LIEELCHHYV NALQWVLDYY YRGVQSWDWY YPFHYTPFIS DLKNIEQVEI 480 481 AFHMGTPFLP FQQLLAVLPA ASAKLLPVAY HDLMLLPTSP LAEFYPLEFE SDLNGKKHDW 540 541 EAVVLIPFID EGRLLAAMLP CEAQLSLEER ERNRHGPMYV YKYSTVAQGP MPAYPPLRAL 600 601 PVLYCTEVAK WSHEIAVNLP YSVCIELPNA ARTVFFPGFP TMQHLPFDFE LRNDRVKVFE 660 661 QVSRNQNIVL KPRKRQLEDT LTAVASQYLG KVIHVGWPHL VKAIVVRVAT RDQRVDSEGI 720 721 TLNDSRRFDS ECKALQEHFI NRMGIQFANY DVLVYVRTFA GNSTEFRDKG ALMVRDSWSS 780 781 SVTGYPAQGV VADLTVWERM RKNFLNVEHY FPVGSTIFLI TDPYYGSEGT VQDPRLAYTN 840 841 GRIQVSIMVR PEPKVNAARQ LQEERDRDYL STFQVCNLLR ISGRTLGRLS GTVWVVLGPR 900 901 RQKMENVTKH NIGLQLKYPR QNEERAGYCF RTNNQWYYSS LAVDLMRNYC QRYPDVIDFF 960 961 GDSNDRAEFV FEQDVFPNAV GHRRVEELAN WVRQQPHMKV ERISCGSKTV CRETIELLIA1020 1021 AVDDLRSLPV KHVKLQVKPH LLIKPNVTLP DVYRSKRPVR LFDRVVIVRT IYMVPVGTKG1080 1081 TVIGIHPVTD PNPVRLECVH AVDTFCKVLF DSPVPNCNNI HGIAEDRVYK VPEIALVIIK1140 1141 TDEEGKKQND CELPVRDPQP NQAQDEPVRA TSSRYVTAAG STSVPITMKT QISDEFVKTR1200 1201 SDPIARTDSY KPSSEPKPVP VPEQITNWRE RVSTPTNKPQ PAPNNWRINR SSSRQQGGSI1260 1261 FVAPPTKTPD AAASTASTAF TAASSATLTP LDQTLALMSV LGVGEDQSSP PLQEAVQQQR1320 1321 PPLLQQQRAP FPGQMPNLPK PPLFWQQEAQ KQEALQQEAQ QQEAQKKQQQ AHAQMEPERI1380 1381 NSQHFYRSGQ TGAALNQPPL GAPSKRQWHE WVHPRMQHAN AFHAGVNNGY QMRPKKNIAA1440 1441 QSTFNNNVHM HLQQPYYPNQ QQQQQQQQPL QLTEINNAPP RYSTIQDFVP IQAYRPKKLN1500 1501 RVQPAGRQDV DATKNPSRSP VLQQPTNETI DTKASSSLPV QSAGEQVIGL MQTLEIKPAA1560 1561 SQSESDGVST GSANAPTATT SSQAVNRRKH RVPRIGAKFD LEYILPDSPH PT |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..451] | 1.85 | Crystal structure of the human FEN1-PCNA complex | |
2 | View Details | [452..611] | N/A | No confident structure predictions are available. | |
3 | View Details | [612..836] | N/A | No confident structure predictions are available. | |
4 | View Details | [837..1011] | N/A | No confident structure predictions are available. | |
5 | View Details | [1012..1612] | 8.39794 | No description for 1y0fA was found. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)