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Protein Overview: Spt6-PA, FBpp0309041

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..359] PSI-BLAST 30.30103 Heavy meromyosin subfragment
2 View Details [360..420] deduced N/A No confident structure predictions are available.
3 View Details [421..1336] PSI-BLAST 1000.0 No description for 2oceA was found.
4 View Details [1337..1474] FFAS03 3.91 The Xlp protein Sap
5 View Details [1475..1831] PSI-BLAST 12.221849 No description for 1y0fB was found.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • ribonuclease activity
  • 4.78408578264511 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 4.47575558124516 bayes_pls_golite062009
  • exoribonuclease activity
  • 4.45956182921702 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 3.99660019081433 bayes_pls_golite062009
  • nucleic acid binding
  • 3.87899047526266 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 3.51306349336452 bayes_pls_golite062009
  • DNA binding
  • 3.47278447192966 bayes_pls_golite062009
  • binding
  • 3.35781855253373 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 3.07263153665399 bayes_pls_golite062009
  • exonuclease activity
  • 2.66053639652924 bayes_pls_golite062009
  • structural constituent of ribosome
  • 2.13063800565247 bayes_pls_golite062009
  • transcription regulator activity
  • 2.10110937001387 bayes_pls_golite062009
  • structural molecule activity
  • 1.9177190829469 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.81524862921454 bayes_pls_golite062009
  • single-stranded DNA binding
  • 1.62996999055328 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 1.36224060256697 bayes_pls_golite062009
  • excinuclease ABC activity
  • 1.24466762466323 bayes_pls_golite062009
  • endonuclease activity
  • 0.991569665925888 bayes_pls_golite062009
  • damaged DNA binding
  • 0.95191912850966 bayes_pls_golite062009
  • transcription factor activity
  • 0.937752547283357 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.76825863122436 bayes_pls_golite062009
  • protein binding
  • 0.767256907671421 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
  • 0.708753843279937 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.598360955770972 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.583085644017496 bayes_pls_golite062009
  • nuclease activity
  • 0.57381531077345 bayes_pls_golite062009
  • translation regulator activity
  • 0.515576958825022 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.510809870824979 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.510809870824979 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.468402630523277 bayes_pls_golite062009
  • telomeric DNA binding
  • 0.361382760487809 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 0.24906263529692 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.233952169113693 bayes_pls_golite062009
  • translation initiation factor activity
  • 0.2080607201312 bayes_pls_golite062009
  • RNA binding
  • 0.18502033889261 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 0.09423425042945 bayes_pls_golite062009
  • DNA polymerase activity
  • 0.0189279348688405 bayes_pls_golite062009
  • endoribonuclease activity
  • 0.016619833072142 bayes_pls_golite062009
  • chromatin binding
  • 0.0075451629397203 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
  • 3.53841763802611 bayes_pls_golite062009
  • protein binding
  • 2.59400723645972 bayes_pls_golite062009
  • transcription regulator activity
  • 2.33050919783116 bayes_pls_golite062009
  • DNA binding
  • 1.69194220365195 bayes_pls_golite062009
  • nucleic acid binding
  • 1.68849923149905 bayes_pls_golite062009
  • transcription factor activity
  • 1.02720628759707 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 0.364108622844773 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle