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Protein Overview: gi|126193574, gi...

General Information:
Name(s) found: gi|254240196 [NCBI NR]
gi|194551181 [NCBI NR]
gi|126193574 [NCBI NR]
Description(s) found:
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  • gi|254240196|ref|ZP_04933518.1| Lon protease [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|194551181|ref|YP_002086208.1| Lon protease [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|126193574|gb|EAZ57637.1| Lon protease [Pseudomonas aeruginosa 2192] [NCBI NR]
    • Organism: Pseudomonas aeruginosa 2192
    Length: 798 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLVELPLL PLRDVVVYPH MVIPLFVGRE KSIEALEAAM TGDKQILLLA QKNPADDDPG  60
   61 EDGLYRMGTV ATVLQLLKLP DGTVKVLVEG EQRGQVERFI EEEGHIRAAV QAIDDANVGE 120
  121 REAEVFTRSL LSQFEQYVQL GKKVPAEVLS SLNSIDEPSR LVDTMAAHMA LKIEQKQDIL 180
  181 EITDLSSRVE HVLALLDAEI DLLQVEKRIR GRVKKQMERS QREYYLNEQM KAIQKELGDI 240
  241 DEGHNEVEEL KKRIDAAGLT KEAHTKATAE LNKLKQMSPM SAEATVVRSY IDWLLNVPWK 300
  301 AESKVRHDLA KAEDILDADH YGLEEVKERI LEYLAVQKRV KKLKGPVLCL VGPPGVGKTS 360
  361 LAESIARATN RKFVRMALGG VRDEAEIRGH RRTYIGSMPG RLIQKMTKVG VRNPLFLLDE 420
  421 IDKMGSDMRG DPASALLEVL DPEQNHNFND HYLEVDYDLS DVMFLCTANS MNIPAPLLDR 480
  481 MEVIRLPGYT EDEKVNIAAK YLIPKQVQAN GLKKGELTFE EGALRDIIRY YTREAGVRSL 540
  541 ERQIAKVCRK AVKEHAKLKR IQAVVSSETL ENYLGVRKFR YGLAEQQDQI GQVTGLAWTQ 600
  601 VGGELLTIEA AVVPGKGQLT KTGSLGDVMA ESITAALTVV RSRAQSLGIA ADFHEKRDIH 660
  661 IHVPEGATPK DGPSAGIGMC TALVSAITQI PVRADVAMTG EITLRGQVLA IGGLKEKLLA 720
  721 AHRGGIKTVI IPEENVRDLK EIPDNIKSDL VIKPVKWIDE VLQIALQYAP EPLPDAAPEM 780
  781 VAKDEKREPD SKERISTH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..589] PSI-BLAST 90.0 Crystal Structure Analysis of ClpB
    2 View Details [590..798] PSI-BLAST 43.522879 Catalytic domain of E.coli Lon protease

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  2.62748401933955 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.55282098898104 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.5316131833172 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.53035702378505 bayes_pls_golite062009
  • binding
    		•  2.4974940028864 bayes_pls_golite062009
  • hydrolase activity
    		•  2.18454736627863 bayes_pls_golite062009
  • ATPase activity
    		•  2.04651885449197 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.87142752786895 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.41477043612798 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.929901285538132 bayes_pls_golite062009
  • nucleotide binding
    		•  0.922442819194247 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.920987930180051 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.920926158369519 bayes_pls_golite062009
  • DNA binding
    		•  0.734219822349235 bayes_pls_golite062009
  • motor activity
    		•  0.70874549510465 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.640772201693186 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.63468044350616 bayes_pls_golite062009
  • GTP binding
    		•  0.621689261700018 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.613020689836258 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.464456497491373 bayes_pls_golite062009
  • GTPase activity
    		•  0.437665353870877 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.434775387083003 bayes_pls_golite062009
  • ATP binding
    		•  0.41092997612902 bayes_pls_golite062009
  • transporter activity
    		•  0.39890191703346 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.385813421701492 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.377870145186619 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.294474570607914 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.282352478532746 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.22939561735194 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.220608508617331 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.219533217661421 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.219157471322311 bayes_pls_golite062009
  • protein binding
    		•  0.193768631623192 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.0756212238097211 bayes_pls_golite062009
  • protein transporter activity
    		•  0.0071389922757723 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.35244774225337 bayes_pls_golite062009
  • hydrolase activity
    		•  1.18773479836745 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  1.18642233210148 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.05662964529454 bayes_pls_golite062009
  • structural molecule activity
    		•  0.95398657951177 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.927662190590087 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.831274075251956 bayes_pls_golite062009
  • peptidase activity
    		•  0.46678532223973 bayes_pls_golite062009
  • DNA binding
    		•  0.445830226393056 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.345231097228971 bayes_pls_golite062009
  • exoribonuclease activity
    		•  0.343836551142441 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  0.321834241843501 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.277818626067707 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.258012116925759 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.257636057176676 bayes_pls_golite062009
  • ATPase activity
    		•  0.256995590197315 bayes_pls_golite062009
  • protein binding
    		•  0.214066724623027 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.161393552073973 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle