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Protein Overview: YPL260W

General Information:
Name(s) found: YPL260W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFASAGQQHP QIVPKEEESI LNYLLEVRSS LAKLKQNRTQ YLNSKDVQTT YQHVLTKVRE  60
   61 LDDIRKNSHE TPAKSAATLI HSTELHNRVD SVLDDVFQLL SLCFLTVGLK NSAPATYASL 120
  121 STVESLLEHL NESNVFTHHD LSPIKERLEE ISKIVEQKNS SPAYDEDGND DRLREIDNER 180
  181 KKNKIEEDLL LRAKLKHCKD EYDILEGKLE EIDPSLSTVM EKLFRIRRGL LSLVASAKKT 240
  241 MSKSDINTNS LLQEQNDLQT NNESLTDDKH LVSQEYVHEK LSVLKNELSE LESNRDDSGK 300
  301 FKSLESHQVA EKGQSVLNGL LDDCHDLVND LSHQKNGGLT LDPYLQPIYE QLIDIKTTLE 360
  361 NLMITRRWTL RETDLFSYQK KLNEIDNKRI NGKFPTKSQD SKGQSILLYL LRRCYAIIYK 420
  421 LLESSEPVSE ALQPIHNQLS TVRRCLLELK RMGGVNNERE LYPYQMKLAS LDNLRTEGIF 480
  481 YDSDGNIPEG QGILNALLAE CFDILHELKV EAEEKAQNST SSDGSDDDDN GESGIDSNSN 540
  541 DSEPESEYQQ E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YPL260W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] MSA 1.004935 View MSA. No confident structure predictions are available.
    2 View Details [160..263] deduced N/A No confident structure predictions are available.
    3 View Details [264..551] MSA 1.004874 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle