YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YPL216W

General Information:
Name(s) found: YPL216W [SGD]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • Putative protein of unknown function; YPL216W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1102 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLNRRKIQ PKEIGQSADS FSETPWVIKE SSERINDYDS DLKKLDFYKR DIFTCEISGK  60
   61 DGLSYFKALK SEEQHREKVR YLLPKELRKA IANFANFSPI RKVGHLVESA FQRFSNRFFI 120
  121 GDTVCLKTIQ KNALITYKEG EPNLVESPTI ENNVTLFLVK DVFQSNGMME SEKGEISAPK 180
  181 LSLYLITECL NRESKGAALI VGQNEIKRPE SHFSKFIIAC FLNEILIKVS NKEHAPWRVK 240
  241 QEYIERYDVN PKCSPNMIDY LPDRMNSSSS ELYTPLTIPP ESDVEPADWK ETSETSETSE 300
  301 TSLSKIKAID DEISVSFDHI YDNVNSLAYN DLKGTVDDKE LPFTGPSIPF ENISYLDSSL 360
  361 EYKNIDQKWF KECSQFPTER LLVVYQFLSF FGRFIGLSHF NFDQFLTTIK CTSPEALVDE 420
  421 YVKINFLKTY NSKGSFTNEK PRNEIYNQVT SSNVSQREKA NVFNADESQR IPSNFTRNQK 480
  481 MRKFITDKST EFVMYSIFKG KPLKNDDMEF QSYEKVNILY IDIVCSLMCL MTDNEPDWNC 540
  541 NLMDNWTEEK RKEEGNKTEI DIAIEKCLNY GDTSWVKLLH NKNFSNGNWL ICLLGILQQN 600
  601 THMIAYSDVA KCITKKILPL SMNFVNLGDE LWDNFRKRLS IKDKIDVLWV LVDFASNFSS 660
  661 YIKELVDKVP KLCNGIRLKL DSAKKEYIKL KRQLKTLTKN RVKLHSNVSM NRYGSDECKG 720
  721 KVNALKVKIA YLMEDIAFLE AKLIQSDIKR LEILGKDRNG NRYYWMDSNG SSSAISEKNE 780
  781 ELYNCCFLWV QGPSEADINF CLDVDVESLK KWELLAKAKG TAYATKEVFS IFRSTDGSYY 840
  841 QIAQGENFMI INSNGILMRP TIPAFIDKKI ISETPEKLLL SHHQWAFFND IEDIHMLVDR 900
  901 LDDLRENEGQ LKKALTSKMD RIEVSYKQQF KIKRRIECDE TFKKNHKLLK NNEFTFPELK 960
  961 RIETTCTSNG QHFSNMEKIS KKLSRTKNDL VLEAILKDVA HLGECERALL KKQQNLIYPL1020
 1021 NFHFEQLRTI DLEFIVETKR KRQEDILTKL LNHQRYKHIS HVSGYGISSQ RVDKAAHLDV1080
 1081 QGILEEIECQ LISRRREDEE RN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) MSB1 RIM8 YPL216W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run RLF2 identification data - first search in cascade Green EM, et al (2005)
    View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] MSA 6.017933 View MSA. No confident structure predictions are available.
    2 View Details [434..1102] deduced N/A No confident structure predictions are available.
    3 View Details [260..432] MSA 3.046996 View MSA. No confident structure predictions are available.
    4 View Details [433..585] deduced N/A No confident structure predictions are available.
    5 View Details [586..678] FFAS03 1.11 Dimerization motif of sir4
    6 View Details [679..1102] FFAS03 1.67 No description for 2oevA was found.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle