| Protein: | YPL216W |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1102 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL216W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1102] | [1..1102] |
|
|
1.0E-97 | [1..415] | [1..397] |
|
|
2.0E-96 | [1..334] | [151..482] |
|
|
6.0E-91 | [21..352] | [3..331] |
|
|
7.0E-82 | [1..418] | [1..339] |
|
Region A: Residues: [1-433] |
1 11 21 31 41 51
| | | | | |
1 MVLLNRRKIQ PKEIGQSADS FSETPWVIKE SSERINDYDS DLKKLDFYKR DIFTCEISGK 60
61 DGLSYFKALK SEEQHREKVR YLLPKELRKA IANFANFSPI RKVGHLVESA FQRFSNRFFI 120
121 GDTVCLKTIQ KNALITYKEG EPNLVESPTI ENNVTLFLVK DVFQSNGMME SEKGEISAPK 180
181 LSLYLITECL NRESKGAALI VGQNEIKRPE SHFSKFIIAC FLNEILIKVS NKEHAPWRVK 240
241 QEYIERYDVN PKCSPNMIDY LPDRMNSSSS ELYTPLTIPP ESDVEPADWK ETSETSETSE 300
301 TSLSKIKAID DEISVSFDHI YDNVNSLAYN DLKGTVDDKE LPFTGPSIPF ENISYLDSSL 360
361 EYKNIDQKWF KECSQFPTER LLVVYQFLSF FGRFIGLSHF NFDQFLTTIK CTSPEALVDE 420
421 YVKINFLKTY NSK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [434-1102] |
1 11 21 31 41 51
| | | | | |
1 GSFTNEKPRN EIYNQVTSSN VSQREKANVF NADESQRIPS NFTRNQKMRK FITDKSTEFV 60
61 MYSIFKGKPL KNDDMEFQSY EKVNILYIDI VCSLMCLMTD NEPDWNCNLM DNWTEEKRKE 120
121 EGNKTEIDIA IEKCLNYGDT SWVKLLHNKN FSNGNWLICL LGILQQNTHM IAYSDVAKCI 180
181 TKKILPLSMN FVNLGDELWD NFRKRLSIKD KIDVLWVLVD FASNFSSYIK ELVDKVPKLC 240
241 NGIRLKLDSA KKEYIKLKRQ LKTLTKNRVK LHSNVSMNRY GSDECKGKVN ALKVKIAYLM 300
301 EDIAFLEAKL IQSDIKRLEI LGKDRNGNRY YWMDSNGSSS AISEKNEELY NCCFLWVQGP 360
361 SEADINFCLD VDVESLKKWE LLAKAKGTAY ATKEVFSIFR STDGSYYQIA QGENFMIINS 420
421 NGILMRPTIP AFIDKKIISE TPEKLLLSHH QWAFFNDIED IHMLVDRLDD LRENEGQLKK 480
481 ALTSKMDRIE VSYKQQFKIK RRIECDETFK KNHKLLKNNE FTFPELKRIE TTCTSNGQHF 540
541 SNMEKISKKL SRTKNDLVLE AILKDVAHLG ECERALLKKQ QNLIYPLNFH FEQLRTIDLE 600
601 FIVETKRKRQ EDILTKLLNH QRYKHISHVS GYGISSQRVD KAAHLDVQGI LEEIECQLIS 660
661 RRREDEERN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [260-432] |
1 11 21 31 41 51
| | | | | |
1 YLPDRMNSSS SELYTPLTIP PESDVEPADW KETSETSETS ETSLSKIKAI DDEISVSFDH 60
61 IYDNVNSLAY NDLKGTVDDK ELPFTGPSIP FENISYLDSS LEYKNIDQKW FKECSQFPTE 120
121 RLLVVYQFLS FFGRFIGLSH FNFDQFLTTI KCTSPEALVD EYVKINFLKT YNS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [433-585] |
1 11 21 31 41 51
| | | | | |
1 KGSFTNEKPR NEIYNQVTSS NVSQREKANV FNADESQRIP SNFTRNQKMR KFITDKSTEF 60
61 VMYSIFKGKP LKNDDMEFQS YEKVNILYID IVCSLMCLMT DNEPDWNCNL MDNWTEEKRK 120
121 EEGNKTEIDI AIEKCLNYGD TSWVKLLHNK NFS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [586-678] |
1 11 21 31 41 51
| | | | | |
1 NGNWLICLLG ILQQNTHMIA YSDVAKCITK KILPLSMNFV NLGDELWDNF RKRLSIKDKI 60
61 DVLWVLVDFA SNFSSYIKEL VDKVPKLCNG IRL
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 1nyhA |
| Description: | Dimerization motif of sir4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [679-1102] |
1 11 21 31 41 51
| | | | | |
1 KLDSAKKEYI KLKRQLKTLT KNRVKLHSNV SMNRYGSDEC KGKVNALKVK IAYLMEDIAF 60
61 LEAKLIQSDI KRLEILGKDR NGNRYYWMDS NGSSSAISEK NEELYNCCFL WVQGPSEADI 120
121 NFCLDVDVES LKKWELLAKA KGTAYATKEV FSIFRSTDGS YYQIAQGENF MIINSNGILM 180
181 RPTIPAFIDK KIISETPEKL LLSHHQWAFF NDIEDIHMLV DRLDDLRENE GQLKKALTSK 240
241 MDRIEVSYKQ QFKIKRRIEC DETFKKNHKL LKNNEFTFPE LKRIETTCTS NGQHFSNMEK 300
301 ISKKLSRTKN DLVLEAILKD VAHLGECERA LLKKQQNLIY PLNFHFEQLR TIDLEFIVET 360
361 KRKRQEDILT KLLNHQRYKH ISHVSGYGIS SQRVDKAAHL DVQGILEEIE CQLISRRRED 420
421 EERN
|
| Detection Method: | |
| Confidence: | 1.67 |
| Match: | 2oevA |
| Description: | No description for 2oevA was found. |
