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Protein Overview: MOD5

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data MOD5 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..128] ORFEUS 14.3 Replication factor C
2 View Details [129..195] ORFEUS 14.3 Replication factor C
3 View Details [196..305] ORFEUS 14.3 Replication factor C
4 View Details [306..428] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • transcription regulator activity
  • 3.37529385176635 bayes_pls_golite062009
  • DNA binding
  • 3.3049326844117 bayes_pls_golite062009
  • nucleic acid binding
  • 3.24981360535232 bayes_pls_golite062009
  • binding
  • 2.79894364685962 bayes_pls_golite062009
  • transcription factor activity
  • 2.44389510173662 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.57041104288348 bayes_pls_golite062009
  • transcription activator activity
  • 1.20323819132961 bayes_pls_golite062009
  • protein binding
  • 0.852654490075478 bayes_pls_golite062009
  • RNA binding
  • 0.84315767580466 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.732558534458316 bayes_pls_golite062009
  • transcription repressor activity
  • 0.686318575498149 bayes_pls_golite062009
  • chromatin binding
  • 0.626365497850853 bayes_pls_golite062009
  • transcription factor binding
  • 0.515821187939278 bayes_pls_golite062009
  • catalytic activity
  • 0.263007611601737 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.200483461579207 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.113925660147477 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.0855506955761403 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle