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Protein Overview: YNR065C

General Information:
Name(s) found: YNR065C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1116 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMTGSVGDG SEFDWEDQKT FISRDGGLTW RFVHNSSGLY ATGDLGNIIV YIPYDPEEDG  60
   61 DFQSEFYYSL DQGRTWNEYE LTNAISSVHP YKLINPTPDG SGSKFIFKGT FATTDSETNS 120
  121 ITSLKGVEYI IDFSAAFDSR TCEEEDFEDW DLADGKCVNG AKYKYRRRKQ DAQCLVKKAF 180
  181 KDLSLDETPC NSCGESDYEC SFEFVRDANG LCIPDYNLIA FSNICDKSKD KSVLVEPLQL 240
  241 IKGDECKTPM KIEPVDIPCD EIPEEGSSDR EIVTTENKFD FEIKFYQYFD TVADESLVML 300
  301 NSIGDAYISH DGGQTIKRFD TNGEKIVEVV FNPYFNSSAY LFGSKGNIFS THDRGHSFMI 360
  361 AKLPEARQLG MPLDFSAKAQ DTFIYYGGKN CESILSPECH AVAYLTKDGG ETFTEMLDNA 420
  421 IHCEFAGTLF EYPSNEEMVM CQVKKKSSET RSLVSSIDFF QGDNKIIFEN IIGYLSTGGY 480
  481 IIVAVPHEDN ELRAYVTIDG TEFAEAKFPY GQDVSKQEAF TILGSEKGSI FLHLATNLES 540
  541 GHDFGNLLKS NSNGTSFVTL EHAVNRNTFG YVDFEKVQGL EGIIITNIVS NREKVGENKE 600
  601 DEQLKTKITF NDGSDWNFLK PPKKDSEGKK FPCDSVSLDK CSLHLHGYTE RKDIRDTYSS 660
  661 GSALGMMFGV GNVGDKLLPY EECSTFLTTD GGETWTEVKK GPHQWEYGDH GGVLVLVPEN 720
  721 AETDSISYST DFGKTWKDYK FCGDKVLVKD IITVPRDSAL RFLLFGEAKN MGSGSFRTYT 780
  781 IDFRNIFERQ CEFDITGKKR ADFKYSPLGS RTGCLFGHQT EFLRKTDEKC FIGNIPLSEF 840
  841 SRNVKNCSCT RQDFECDYNF YKASDGTCKL VKGLSSANGA DICKKEPDLI EYYDSSGYRK 900
  901 IPLSTCKGGL KLDAHLAPHP CPGKEKAFRE KYSINTGAYA LVFVTILLVI FFAAWFVYDR 960
  961 GIRRNGGFSR FEEIRLGDDG LIENNRTDRV VNIIVRLGLC ISLITKSAFQ RTKAGVARFS1020
 1021 SKLRARFGNR KGPTYSSLLQ GQFSDESDGL HEDANDLSSF TSQDSNFEIE QEDAYRPEQE1080
 1081 HTSQIDQPAT SNIPDALPAR SAIHKPDSTA VRNEDE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AAC3 BZZ1 HXT6 LAS17 MYO4 PEP1 RPN1 RVS167 SLA1 VRP1 YNR065C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] deduced N/A No confident structure predictions are available.
    2 View Details [230..966] MSA 6.019001 View MSA. No confident structure predictions are available.
    3 View Details [967..1116] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle