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Protein Overview: YNR065C

General Information:
Name(s) found: YNR065C [SGD]
Description(s) found:
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  • gi|6324393|ref|NP_014463.1| Protein of unknown function; YNR065C is not an essential gene; Ynr065cp [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S63397 probable membrane protein YNR065c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1730694|sp|P53751.1|YN94_YEAST RecName: Full=Uncharacterized membrane glycoprotein YNR065C [NCBI NR]
  • gi|1302594|emb|CAA96347.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized membrane glycoprotein YNR065C OS=Saccharomyces cerevisiae GN=YNR065C PE=1 SV=1 [Swiss-Prot]
  • YSN1 Sortilin homolog, interacts with proteins of the endocytic machinery [mips]
  • Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene [SGD]
  • (P53751) Putative 125.2 kDa membrane glycoprotein in BIO3-HXT17 intergenic region [4932.FASTACCERV.txt]
  • Chr XIV from 753695-750345, reverse complement [hmr_yeast5_DM3-1_pombe.fasta]
  • Chr XIV from 750345-753695, reverse complement [yeastorf3.fasta]
  • YNR065C, Chr XIV from 750345-753695, reverse complement [yeast_orfs2]
  • YSN1 SGDID:S0005348, Chr XIV from 753697-750347, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • YSN1 SGDID:S0005348, Chr XIV from 753698-750348, reverse complement, Uncharacterized ORF [10112005cervSGD.fasta]
  • Sortilin homolog, interacts with proteins of the endocytic machinery [Saccharomyces cerevisiae]gi|1302594|emb|CAA96347.1| unnamed protein product [Saccharomyces cerevisiae]gi|2132812|pir||S63397 probable membrane protein YNR065c - yeast (Saccharomyces c [nrdb_11152004_Chlamydomonas]
  • YNR065C SGDID:S000005348, Chr XIV from 753700-750350, reverse complement, Uncharacterized ORF, "Sortilin homolog, interacts with proteins of the endocytic machinery" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YNR065C SGDID:S000005348, Chr XIV from 753700-750350, reverse complement, Uncharacterized ORF, "Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • Sortilin homolog, interacts with proteins of the endocytic machinery; Ysn1p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Putative 125.2 kDa membrane glycoprotein in BIO3-HXT17 intergenic region [nr-271106-contam.fasta]
  • YNR065C SGDID:S000005348, Chr XIV from 753701-750351, reverse complement, Uncharacterized ORF, "Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene" [SGD_S-cerevisiae_na_01-05-2010_reversed.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized membrane glycoprotein YNR065C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR065C PE=2 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YNR065C SGDID:S000005348, Chr XIV from 753700-750350, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene" [yeast-030211-contam.fasta]
  • Uncharacterized membrane glycoprotein YNR065C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR065C PE=4 SV=1 [YEAST.fasta.20131015]
  • YNR065C SGDID:S000005348, Chr XIV from 753700-750350, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 1116 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMTGSVGDG SEFDWEDQKT FISRDGGLTW RFVHNSSGLY ATGDLGNIIV YIPYDPEEDG  60
   61 DFQSEFYYSL DQGRTWNEYE LTNAISSVHP YKLINPTPDG SGSKFIFKGT FATTDSETNS 120
  121 ITSLKGVEYI IDFSAAFDSR TCEEEDFEDW DLADGKCVNG AKYKYRRRKQ DAQCLVKKAF 180
  181 KDLSLDETPC NSCGESDYEC SFEFVRDANG LCIPDYNLIA FSNICDKSKD KSVLVEPLQL 240
  241 IKGDECKTPM KIEPVDIPCD EIPEEGSSDR EIVTTENKFD FEIKFYQYFD TVADESLVML 300
  301 NSIGDAYISH DGGQTIKRFD TNGEKIVEVV FNPYFNSSAY LFGSKGNIFS THDRGHSFMI 360
  361 AKLPEARQLG MPLDFSAKAQ DTFIYYGGKN CESILSPECH AVAYLTKDGG ETFTEMLDNA 420
  421 IHCEFAGTLF EYPSNEEMVM CQVKKKSSET RSLVSSIDFF QGDNKIIFEN IIGYLSTGGY 480
  481 IIVAVPHEDN ELRAYVTIDG TEFAEAKFPY GQDVSKQEAF TILGSEKGSI FLHLATNLES 540
  541 GHDFGNLLKS NSNGTSFVTL EHAVNRNTFG YVDFEKVQGL EGIIITNIVS NREKVGENKE 600
  601 DEQLKTKITF NDGSDWNFLK PPKKDSEGKK FPCDSVSLDK CSLHLHGYTE RKDIRDTYSS 660
  661 GSALGMMFGV GNVGDKLLPY EECSTFLTTD GGETWTEVKK GPHQWEYGDH GGVLVLVPEN 720
  721 AETDSISYST DFGKTWKDYK FCGDKVLVKD IITVPRDSAL RFLLFGEAKN MGSGSFRTYT 780
  781 IDFRNIFERQ CEFDITGKKR ADFKYSPLGS RTGCLFGHQT EFLRKTDEKC FIGNIPLSEF 840
  841 SRNVKNCSCT RQDFECDYNF YKASDGTCKL VKGLSSANGA DICKKEPDLI EYYDSSGYRK 900
  901 IPLSTCKGGL KLDAHLAPHP CPGKEKAFRE KYSINTGAYA LVFVTILLVI FFAAWFVYDR 960
  961 GIRRNGGFSR FEEIRLGDDG LIENNRTDRV VNIIVRLGLC ISLITKSAFQ RTKAGVARFS1020
 1021 SKLRARFGNR KGPTYSSLLQ GQFSDESDGL HEDANDLSSF TSQDSNFEIE QEDAYRPEQE1080
 1081 HTSQIDQPAT SNIPDALPAR SAIHKPDSTA VRNEDE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AAC3 BZZ1 HXT6 LAS17 MYO4 PEP1 RPN1 RVS167 SLA1 VRP1 YNR065C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] deduced N/A No confident structure predictions are available.
    2 View Details [230..966] MSA 6.019001 View MSA. No confident structure predictions are available.
    3 View Details [967..1116] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle