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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YNR065C
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMTGSVGDG SEFDWEDQKT FISRDGGLTW RFVHNSSGLY ATGDLGNIIV YIPYDPEEDG  60
   61 DFQSEFYYSL DQGRTWNEYE LTNAISSVHP YKLINPTPDG SGSKFIFKGT FATTDSETNS 120
  121 ITSLKGVEYI IDFSAAFDSR TCEEEDFEDW DLADGKCVNG AKYKYRRRKQ DAQCLVKKAF 180
  181 KDLSLDETPC NSCGESDYEC SFEFVRDANG LCIPDYNLIA FSNICDKSKD KSVLVEPLQL 240
  241 IKGDECKTPM KIEPVDIPCD EIPEEGSSDR EIVTTENKFD FEIKFYQYFD TVADESLVML 300
  301 NSIGDAYISH DGGQTIKRFD TNGEKIVEVV FNPYFNSSAY LFGSKGNIFS THDRGHSFMI 360
  361 AKLPEARQLG MPLDFSAKAQ DTFIYYGGKN CESILSPECH AVAYLTKDGG ETFTEMLDNA 420
  421 IHCEFAGTLF EYPSNEEMVM CQVKKKSSET RSLVSSIDFF QGDNKIIFEN IIGYLSTGGY 480
  481 IIVAVPHEDN ELRAYVTIDG TEFAEAKFPY GQDVSKQEAF TILGSEKGSI FLHLATNLES 540
  541 GHDFGNLLKS NSNGTSFVTL EHAVNRNTFG YVDFEKVQGL EGIIITNIVS NREKVGENKE 600
  601 DEQLKTKITF NDGSDWNFLK PPKKDSEGKK FPCDSVSLDK CSLHLHGYTE RKDIRDTYSS 660
  661 GSALGMMFGV GNVGDKLLPY EECSTFLTTD GGETWTEVKK GPHQWEYGDH GGVLVLVPEN 720
  721 AETDSISYST DFGKTWKDYK FCGDKVLVKD IITVPRDSAL RFLLFGEAKN MGSGSFRTYT 780
  781 IDFRNIFERQ CEFDITGKKR ADFKYSPLGS RTGCLFGHQT EFLRKTDEKC FIGNIPLSEF 840
  841 SRNVKNCSCT RQDFECDYNF YKASDGTCKL VKGLSSANGA DICKKEPDLI EYYDSSGYRK 900
  901 IPLSTCKGGL KLDAHLAPHP CPGKEKAFRE KYSINTGAYA LVFVTILLVI FFAAWFVYDR 960
  961 GIRRNGGFSR FEEIRLGDDG LIENNRTDRV VNIIVRLGLC ISLITKSAFQ RTKAGVARFS1020
 1021 SKLRARFGNR KGPTYSSLLQ GQFSDESDGL HEDANDLSSF TSQDSNFEIE QEDAYRPEQE1080
 1081 HTSQIDQPAT SNIPDALPAR SAIHKPDSTA VRNEDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle