| General Information: |
|
| Name(s) found: |
YMR046C
[SGD]
|
| Description(s) found:
Found 25 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 440 amino acids |
Gene Ontology: |
|
| Cellular Component: |
retrotransposon nucleocapsid
[ISS ]
|
| Biological Process: |
transposition, RNA-mediated
[ISS]
|
| Molecular Function: |
RNA binding
[ISS]
protein binding [ISS ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MESQQLSQHS PISHGSACAS VTSKEVQTTQ DPLDISASKT EECEKVSTQA NSQQPTTPLS 60
61 SAVPENHHHA SPQAAQVPLP QNGPYPQQRM MNTQQANISG WPVYGHPSLM PYPPYQMSPM 120
121 YAPPGAQSQF TQYPQYVGTH LNTPSPESGN SFPDSSSAKS NMTSTNQHVR PPPILTSPND 180
181 FLNWVKIYIK FLQNSNLGDI IPTATRKAVR QMTDDELTFL CHTFQLFAPS QFLPPWVKDI 240
241 LSVDYTDIMK ILSKSINKMQ SDTQEVNDIT TLATLHYNGS TPADAFEAEV TNILDRLNNN 300
301 GIPINNKVAC QFIMRGLSGE YKFLRYARHR CIHMTVADLF SDIHSMYEEQ QESKRNKSTH 360
361 RRSPSDEKKD SRTYTNTTKP KSITRNSQKP NNSQSRTARA HNVSTFNNSP GPDNDLIRGS 420
421 TTEPIQLKNT HDLHLRPGTY |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Qiu et al. (2008) |
|
YDR210C-C YDR210C-D YMR046C YOR343W-A YOR343W-B |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | Dam1-765 complex purified from yeast with Dad1-TAP | Shimogawa MM, et al. (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Hazbun TR, et al. (2003) | ||
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..121] |  |
74.124939 | No description for PF01021.10 was found. No confident structure predictions are available. |
| 2 | View Details | [122..212] | |
1.133994 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [213..328] | |
N/A | No confident structure predictions are available. |
| 4 | View Details | [329..440] | |
1.007973 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)