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Protein Overview: YJR141W

General Information:
Name(s) found: YJR141W [SGD]
Description(s) found:
Found 28 descriptions.
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  • Essential protein of unknown function [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: mRNA processing [IPILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQYVVEWLP RIQSISVVVE GWKQVEIKNL KDTLMSISGD EEQVEDILLP VEVEEKVDAS  60
   61 YKFKNRGKDL EWMTKLRSKS SKIYDSSIMS LPDGRWTKEE LRSDSDFSIE CLNCKQKIIS 120
  121 KDNCQVLNDM PSEFWFELMD YWHCHKPDVK EDKSSYTRFE TLKPSKNEIL IGSSYFQGTP 180
  181 ATFENVATTK ENDNVLCIKC SAVLGQVTAG SLYKLHKWKL QLIRSGNTYK FPPECDITIS 240
  241 LINVVKANSC RYVLVKCKTE SLLVWIFSVD IGVTLTGNKS FKRAMKLLYT NSVTTINRCL 300
  301 NRQVVEELDF QETSFNAFYS ALQHTNALLP SSMKKIGEWT ISYTSLI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AAC3 ARO1 CYS4 HEF3 HOR2 HXT7 MTC5 PGM2 RFA3 RHR2 YJR141W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen HSH49 YJR141W 2 Unpublished Fields Lab Data
    View Screen MPE1 YJR141W 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YJR141W Unpublished Data
    View Data YJR141W and SPC42 Unpublished Data

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..347] deduced N/A No confident structure predictions are available.
    2 View Details [278..347] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.402276250313619 bayes_pls_golite062009
  • catalytic activity
    		•  0.223774911842048 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle