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Protein Overview: TRM12

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Krogan NJ, et al. (2006) PLB3 RPS10B SCM3 SUP35 SUP45 TRM12 VPS3

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TRM12 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..226] deduced N/A No confident structure predictions are available.
2 View Details [227..462] PSI-BLAST 26.221849 Arginine methyltransferase, HMT1

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • methyltransferase activity
  • 4.15445027778357 bayes_pls_golite062009
  • N-methyltransferase activity
  • 4.07806017452628 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
  • 4.07153733729662 bayes_pls_golite062009
  • protein methyltransferase activity
  • 3.92746815303714 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
  • 3.07428840534971 bayes_pls_golite062009
  • histone methyltransferase activity
  • 2.99461585647365 bayes_pls_golite062009
  • transferase activity
  • 2.926540904444 bayes_pls_golite062009
  • tRNA methyltransferase activity
  • 2.5931020126592 bayes_pls_golite062009
  • arginine N-methyltransferase activity
  • 2.41876112831625 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
  • 2.41876112831625 bayes_pls_golite062009
  • rRNA methyltransferase activity
  • 2.29640050660273 bayes_pls_golite062009
  • DNA-methyltransferase activity
  • 2.18991764495147 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
  • 2.04296107639729 bayes_pls_golite062009
  • tRNA (cytosine-5-)-methyltransferase activity
  • 1.88889414729709 bayes_pls_golite062009
  • tRNA (cytosine)-methyltransferase activity
  • 1.88889414729709 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
  • 1.66871163498737 bayes_pls_golite062009
  • tRNA (adenine-N1-)-methyltransferase activity
  • 1.29759910099835 bayes_pls_golite062009
  • tRNA (adenine)-methyltransferase activity
  • 1.29759910099835 bayes_pls_golite062009
  • catalytic activity
  • 1.25333584501255 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
  • 1.1103522853299 bayes_pls_golite062009
  • transcription regulator activity
  • 0.914549843668268 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
  • 0.89325812193225 bayes_pls_golite062009
  • DNA binding
  • 0.86027591375666 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
  • 0.703178429468566 bayes_pls_golite062009
  • nucleic acid binding
  • 0.616949327277483 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
  • 0.533090627724779 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
  • 0.455449410561251 bayes_pls_golite062009
  • RNA binding
  • 0.417524996559564 bayes_pls_golite062009
  • binding
  • 0.383237930789959 bayes_pls_golite062009
  • protein-arginine omega-N symmetric methyltransferase activity
  • 0.364369105571521 bayes_pls_golite062009
  • hydrolase activity
  • 0.33020971648583 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
  • 0.203168546434167 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle