Protein Overview: YLR287C

General Information:
Name(s) found:	YLR287C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|74676371\|sp\|Q05881.1\|YL287_YEAST RecName: Full=Uncharacterized protein YLR287C [NCBI NR] gi\|6323317\|ref\|NP_013389.1\| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene; Ylr287cp [Saccharomyces cerevisiae] [NCBI NR] gi\|596044\|gb\|AAB67332.1\| Ylr287cp [Saccharomyces cerevisiae] [NCBI NR] gi\|51012643\|gb\|AAT92615.1\| YLR287C [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S50372 hypothetical protein YLR287c - yeast (Saccharomyces cerevisiae) [NCBI NR] Uncharacterized protein YLR287C OS=Saccharomyces cerevisiae GN=YLR287C PE=1 SV=1 [Swiss-Prot] Protein of unknown function localised to cytoplasm [mips] Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene [SGD] YLR287C, Chr XII from 710991-712058, reverse complement [yeast_orfs2] Chr XII from 710991-712058, reverse complement [yeastorf3.fasta] Chr XII from 712058-710991, reverse complement [yeastorf5.fasta] >Q05881 (Q05881) Chromosome XII COSMID 8003 [4932.FASTACCERV.txt] YLR287C SGDID:S0004277, Chr XII from 712060-710993, reverse complement, Uncharacterized ORF [yeastflysequest.fasta] Ylr287cp [Saccharomyces cerevisiae]gi\|51012643\|gb\|AAT92615.1\| YLR287C [Saccharomyces cerevisiae]gi\|1077343\|pir\|\|S50372 hypothetical protein YLR287c - yeast (Saccharomyces cerevisiae)gi\|596044\|gb\|AAB67332.1\| L8003.14 gene product [nrdb_11152004_Chlamydomonas] (Q05881) Ylr287cp (YLR287C) [cerv4932.FASTAC] YLR287C SGDID:S000004277, Chr XII from 712060-710993, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YLR287C SGDID:S000004277, Chr XII from 712060-710993, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene" [yeast-contam.fasta] L8003.14 gene product [nr-271106-contam.fasta] YLR287C [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Uncharacterized protein YLR287C [nr-271106-contam.fasta] Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene; Ylr287cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] [chemostatdb.fasta] Uncharacterized protein YLR287C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR287C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YLR287C SGDID:S000004277, Chr XII from 712058-710991, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene" [yeast-030211-contam.fasta] YLR287C SGDID:S000004277, Chr XII from 712058-710991, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene" [20141208_orf_trans.fasta]
Organism:	Saccharomyces cerevisiae
Length:	355 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGSSDRKD DVKLLELLNS IDEQFLVPYK KPEDLRKISS TTKLQGSTPT KELDKLASVL  60
   61 KAHCTKIGIV CKPGTFDNNH KVVITEIQNF SRPLFYLLSL FPLFYNNKDC PKYFTDQLDE 120
  121 STLQLLDGLR DFIAELQERL KNDENASLDK ERLTSVGKIF NACDSLSNCS KAGPYGILAN 180
  181 ILKDNVAIMD DTMNEIKEWL EEPDFSANSD DIFLDFEDSE SESDSQKEEF DQEKVYENIK 240
  241 LFFDGFTRKI KLIKLLVSTF RKTLVSKDFT PKRNQAETLD SIHTYLKEIQ LLLDEVVSTV 300
  301 QFEPKNFTNE EVKEEQAALV AVTKKVLIQM SKLYEGDPKR KKWIDTWEIK FNELF

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		RIM21 USA1 YLR287C
View Details	Gavin AC, et al. (2006)		MRP8 PIL1 YLR287C
View Details	Ho Y, et al. (2002)		RPP0 TIF6 YLR287C

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	CEP3	sample cbf3 from feb 2005	Sandall S, et all (2006)
View Run	RPA135	No Comments	Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	NAF1	YLR287C	1	Hazbun TR, et al. (2003)

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YLR287C	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..60] [139..176]	ORFEUS	8.2	Adenylosuccinate lyase
2	View Details	[61..138] [177..355]	ORFEUS	8.2	Adenylosuccinate lyase

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2