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Protein Overview: IXR1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)
View Run MLP2 #22 Asynchronous Prep2-IMAC Phosphopeptide enrichment B1-2 Keck JM, et al. (2011)
View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data IXR1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..121] MSA 1.017991 View MSA. No confident structure predictions are available.
2 View Details [122..173] deduced N/A No confident structure predictions are available.
3 View Details [174..336] PSI-BLAST 39.071898 Upstream binding factor
4 View Details [337..427] PSI-BLAST 58.045757 Sox-5
5 View Details [428..511] PSI-BLAST 41.29073 NHP6a
6 View Details [512..597] MSA 1.177993 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 3.04393542109417 bayes_pls_golite062009
  • DNA binding
  • 1.88326659692279 bayes_pls_golite062009
  • nucleic acid binding
  • 1.85157640081091 bayes_pls_golite062009
  • chromatin binding
  • 1.82810083714605 bayes_pls_golite062009
  • transcription regulator activity
  • 1.34639198670075 bayes_pls_golite062009
  • protein binding
  • 1.33904668423876 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.08208740778246 bayes_pls_golite062009
  • transcription factor activity
  • 0.585772620695985 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.45921402500371 bayes_pls_golite062009
  • transcription factor binding
  • 0.19768703289845 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.16971196361447 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
  • 3.04393542109417 bayes_pls_golite062009
  • DNA binding
  • 1.88326659692279 bayes_pls_golite062009
  • nucleic acid binding
  • 1.85157640081091 bayes_pls_golite062009
  • chromatin binding
  • 1.82810083714605 bayes_pls_golite062009
  • transcription regulator activity
  • 1.34639198670075 bayes_pls_golite062009
  • protein binding
  • 1.33904668423876 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.08208740778246 bayes_pls_golite062009
  • transcription factor activity
  • 0.585772620695985 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.45921402500371 bayes_pls_golite062009
  • transcription factor binding
  • 0.19768703289845 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.16971196361447 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
  • 3.04393542109417 bayes_pls_golite062009
  • DNA binding
  • 1.88326659692279 bayes_pls_golite062009
  • nucleic acid binding
  • 1.85157640081091 bayes_pls_golite062009
  • chromatin binding
  • 1.82810083714605 bayes_pls_golite062009
  • transcription regulator activity
  • 1.34639198670075 bayes_pls_golite062009
  • protein binding
  • 1.33904668423876 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.08208740778246 bayes_pls_golite062009
  • transcription factor activity
  • 0.585772620695985 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.45921402500371 bayes_pls_golite062009
  • transcription factor binding
  • 0.19768703289845 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.16971196361447 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle