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Protein Overview: RME1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RME1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..172] PSI-BLAST 15.69897 Transcription factor IIIA, TFIIIA
2 View Details [173..251] PSI-BLAST 26.221849 Designed zinc finger protein
3 View Details [252..300] PSI-BLAST 2.045757 Transcription factor sp1

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • transcription regulator activity
  • 4.70988788192472 bayes_pls_golite062009
  • nucleic acid binding
  • 4.58713908116892 bayes_pls_golite062009
  • DNA binding
  • 4.56219307357342 bayes_pls_golite062009
  • transcription factor activity
  • 3.50954949535763 bayes_pls_golite062009
  • transcription repressor activity
  • 3.27542149084008 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 3.22082323675675 bayes_pls_golite062009
  • binding
  • 3.10743787485868 bayes_pls_golite062009
  • transcription activator activity
  • 2.19952417915035 bayes_pls_golite062009
  • chromatin binding
  • 2.18464662431232 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 1.63161912031789 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.42975942698743 bayes_pls_golite062009
  • transcription factor binding
  • 1.39608963544799 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.34049786451995 bayes_pls_golite062009
  • protein binding
  • 1.00484935878505 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.77874411480713 bayes_pls_golite062009
  • catalytic activity
  • 0.245893663605433 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle