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Protein Overview: YEL020C

General Information:
Name(s) found: YEL020C [SGD]
Description(s) found:
Found 22 descriptions.
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  • Hypothetical protein with low sequence identity to Pdc1p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTATQHFA QLLQKYGIDT VFGIVGIPIV QLADTMVANG IKFIPCRNEQ AASYAASAYG  60
   61 YISDKPGVLL IVGGPGLIHA LAGIYNSMSN RWPLLVIAGS SSQSDIHKGG FQELDQVSLL 120
  121 SPFLKFTGKL TPDNIDMITQ KALNYCIQGT AGVSYIDVPA DFIEYEKPLE GNDRTGNELP 180
  181 MILTPNICGP DPSKIKKVVQ LILQHKNKNI LIVIGKGAVK NSHEIRRLVN TFNLPFLPTP 240
  241 MAKGIVPDSS PLNVSSARSQ ALKIADIVLV LGARLNWILH FGTSPKWNSE SIFIQFDSNP 300
  301 ETLGDNNVSP GADLSIWGDI GLSVTALVEE LTRQDSCWKY SGVKQEIREK IQLNQTRLLR 360
  361 KEKTRGAQLN YNQVYGTLRP LIDDYRTILV TEGANTMDIA RISFPTDAPR RRLDAGTNAT 420
  421 MGIGLGYALA CKASHPELDV VLIQGDSAFG FSAMEIETAV RCQLALVIVV MNNSGIYHGE 480
  481 KDIEGDLPPT ALSKNCRYDL VGKGLGANDF FVNTISELSR CFQQAVQLSR TKRETSVINV 540
  541 IIEPGEQKQI AFAWQNKPRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen HBT1 YEL020C 1 Unpublished Fields Lab Data
    View Screen MET18 YEL020C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YEL020C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 408.0103 Pyruvate oxidase
    2 View Details [186..354] PSI-BLAST 408.0103 Pyruvate oxidase
    3 View Details [355..560] PSI-BLAST 408.0103 Pyruvate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acetolactate synthase activity
    		•  12.903449876837 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  12.3239025230705 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  5.28857071459273 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  5.21233670052586 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  5.08663245333808 bayes_pls_golite062009
  • transketolase activity
    		•  2.50501741089295 bayes_pls_golite062009
  • catalytic activity
    		•  2.25537597692103 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  2.15444163802756 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.98546381612935 bayes_pls_golite062009
  • thiamin pyrophosphate binding
    		•  1.87247313698582 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.82969293063325 bayes_pls_golite062009
  • deoxyhypusine synthase activity
    		•  1.46517585302326 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.0611726850452 bayes_pls_golite062009
  • protein deacetylase activity
    		•  0.882978552120903 bayes_pls_golite062009
  • histone deacetylase activity
    		•  0.881399086357632 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.78591260444574 bayes_pls_golite062009
  • hydrolase activity
    		•  0.536729211484905 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.51426028502998 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.492590326775569 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.459800433209317 bayes_pls_golite062009
  • transferase activity
    		•  0.413024577830522 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  0.38348854354211 bayes_pls_golite062009
  • NAD-dependent protein deacetylase activity
    		•  0.38348854354211 bayes_pls_golite062009
  • deacetylase activity
    		•  0.382228826641711 bayes_pls_golite062009
  • binding
    		•  0.313299160093284 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.217707914161459 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0424046736878951 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle