YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SIZ1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

  PROTEIN(S) PUBLICATION
View Data SIZ1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..106] Pfam 10.236572 SAP domain No confident structure predictions are available.
2 View Details [107..219] MSA 2.025996 View MSA. No confident structure predictions are available.
3 View Details [220..289] deduced N/A No confident structure predictions are available.
4 View Details [290..410] Pfam 33.60206 MIZ zinc finger No confident structure predictions are available.
5 View Details [411..529] MSA 2.172996 View MSA. No confident structure predictions are available.
6 View Details [530..904] ORFEUS 8.34 RBP1

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • SUMO ligase activity
  • 7.09211721404578 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 5.19208367271658 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 4.23914967265256 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 2.74673402515898 bayes_pls_golite062009
  • binding
  • 2.26662406320154 bayes_pls_golite062009
  • protein binding
  • 1.60046728943053 bayes_pls_golite062009
  • nucleic acid binding
  • 1.45346081057303 bayes_pls_golite062009
  • DNA binding
  • 1.3220534257427 bayes_pls_golite062009
  • transcription regulator activity
  • 1.24563554819776 bayes_pls_golite062009
  • transcription factor binding
  • 0.6524624181863 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.55208373081056 bayes_pls_golite062009
  • catalytic activity
  • 0.454272578060498 bayes_pls_golite062009
  • ligase activity
  • 0.36302660895622 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.11065840905983 bayes_pls_golite062009
  • nuclear hormone receptor binding
  • 0.0906176057893404 bayes_pls_golite062009
  • steroid hormone receptor binding
  • 0.0808240821039099 bayes_pls_golite062009
  • transcription activator activity
  • 0.0459673376823702 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle