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Protein Overview: YDL233W

General Information:
Name(s) found: YDL233W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YDL233W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQGPPQPPP QAVPMPYIVN NNTPPYPNGN INFPPTAQQN IPPTVYPQQV PFPGQPQGGQ  60
   61 FPQPSSEQQV FNQLPQVTQT FHNSAQNTNA TGGPGSGSMP MFTPVASFPH PMATAATAAA 120
  121 PLPRSASQAS LSMLRVPYHV RKYLSNLAML KLYEIINEVN TAMGKIGLLS FWTELISDIF 180
  181 TPDAVIRYSK KSMTDYREFE FIIPVFPVIC STLGRFGIVR MEVKVLQLKT QVLSNSTIFF 240
  241 NCPRVTFVYY YPDGSYITHF SQMKGAFDLD LKINWLDVSM HSFVPDIEWN AVERLLSDDT 300
  301 KSTEIEQIFR KLKQEDVKEQ GNSFAENNAT NVPPNFEAIT QLRSYFDVFR NVSVFGTQEG 360
  361 LMRVMQISTV MSTLKNLRKF QIEKNIDSPV TALSAYIDAD KKDSGSEPLH AKRRRNSGIS 420
  421 PRTTTLGPNG NSNTSNEELP TSDVNDINKD MTKKKMKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YDL233W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] ORFEUS 9.76 Sec24
    2 View Details [193..458] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle