Protein Overview: YDL233W

General Information:
Name(s) found:	YDL233W [SGD]
Description(s) found: Found 22 descriptions. SHOW ALL	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YDL233W is not an essential gene [SGD]
Organism:	Saccharomyces cerevisiae
Length:	458 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytoplasm [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQGPPQPPP QAVPMPYIVN NNTPPYPNGN INFPPTAQQN IPPTVYPQQV PFPGQPQGGQ  60
   61 FPQPSSEQQV FNQLPQVTQT FHNSAQNTNA TGGPGSGSMP MFTPVASFPH PMATAATAAA 120
  121 PLPRSASQAS LSMLRVPYHV RKYLSNLAML KLYEIINEVN TAMGKIGLLS FWTELISDIF 180
  181 TPDAVIRYSK KSMTDYREFE FIIPVFPVIC STLGRFGIVR MEVKVLQLKT QVLSNSTIFF 240
  241 NCPRVTFVYY YPDGSYITHF SQMKGAFDLD LKINWLDVSM HSFVPDIEWN AVERLLSDDT 300
  301 KSTEIEQIFR KLKQEDVKEQ GNSFAENNAT NVPPNFEAIT QLRSYFDVFR NVSVFGTQEG 360
  361 LMRVMQISTV MSTLKNLRKF QIEKNIDSPV TALSAYIDAD KKDSGSEPLH AKRRRNSGIS 420
  421 PRTTTLGPNG NSNTSNEELP TSDVNDINKD MTKKKMKF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	CEP3	sample cbf3 from feb 2005	Sandall S, et all (2006)
View Run	MLP2	#24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	PCF11	YDL233W	1	Unpublished Fields Lab Data
View Screen	RRB1	YDL233W	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YDL233W	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..192]	ORFEUS	9.76	Sec24
2	View Details	[193..458]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.85

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2