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Protein Overview: GFD2

General Information:
Name(s) found: GFD2 / YCL036W [SGD]
Description(s) found:
Found 23 descriptions.
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  • Protein of unknown function, identified as a high-copy suppressor of a dbp5 mutation [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVQKMVRDN SNNGSDKSVH WERRNNNGAG PRYRSRSGNT GALATKLSNG TLSVRGLVKD  60
   61 RTGSGKIAGC VEAFLDARTQ LNTPWDRAKC NWLDQIDYYV QLRKTAFSKE LDQLRKPMID 120
  121 AYVAEMRQKF DASYGQSRAQ LEAKLAQVDS EWHMVHGDVH AKLEKLVEER RFLKRLSDTI 180
  181 VPPRSKRSQR LSPLTKEDRA NCICPQPKGM SDTAWFEAIQ KKMLGMNGTI KLLETEQKLL 240
  241 ADEKNSVRKT FWPMVEAHSR SNEFAYLEKC IRLMASQRAI CFCLDIEAFE TNQNVITEIG 300
  301 ISIYDPRENM VPSMVPITKN YHLIIEESLE LRNQKWVCDY KDCYLLGESY VLSLKECVHF 360
  361 IQSLINYYLV PVTEEDKTWS RAFVGHHVSG DLKWLETIGV KFPGRGYEGH LDHTLLLAET 420
  421 PGDLDVFILD TEQFYRKSYG EKGSSLGKIL RLFEIPHAFL HNAGNDAYYT LHLFMKFCDV 480
  481 NFRKISGMDD VLKVMGQVKV WGERDVREPK VVPMSYAISI EEAVKNRTYR KGVKSSRKER 540
  541 VCQTEFGGLT YFGTAKDAFT STLPTH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GFD2 NAN1 POL5 UTP10 UTP15 UTP4 UTP5 UTP8 UTP9

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] deduced N/A No confident structure predictions are available.
    2 View Details [260..507] MSA 1.003937 View MSA. No confident structure predictions are available.
    3 View Details [508..566] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle