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Protein Overview: YBR235W

General Information:
Name(s) found: YBR235W [SGD]
Description(s) found:
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  • gi|6319712|ref|NP_009794.1| Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family; YBR235W is not an essential gene; Ybr235wp [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S46111 probable membrane protein YBR235w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|586352|sp|P38329.1|YB85_YEAST RecName: Full=Uncharacterized membrane protein YBR235W [NCBI NR]
  • gi|536637|emb|CAA85198.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized membrane protein YBR235W OS=Saccharomyces cerevisiae GN=YBR235W PE=1 SV=1 [Swiss-Prot]
  • Putative ion transport protein [mips]
  • Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family; YBR235W is not an essential gene [SGD]
  • YBR235W, Chr II from 686859-690221 [yeast_orfs2]
  • Chr II from 686859-690221 [yeastorf3.fasta]
  • Chr II from 686858-690220 [yeastorf4.fasta]
  • Chr II from 686856-690218 [yeastorf5.fasta]
  • (P38329) Hypothetical 124.0 kDa protein in PBP2-ABD1 intergenic region [4932.FASTACCERV.txt]
  • YBR235W SGDID:S0000439, Chr II from 686858-690220, Uncharacterized ORF [yeastflysequest.fasta]
  • YBR235W SGDID:S0000439, Chr II from 686896-690258, Uncharacterized ORF [10112005cervSGD.fasta]
  • Ybr235wp [Saccharomyces cerevisiae]gi|536637|emb|CAA85198.1| unnamed protein product [Saccharomyces cerevisiae]gi|626244|pir||S46111 probable membrane protein YBR235w - yeast (Saccharomyces cerevisiae)gi|586352|sp|P38329|YB85_YEAST Hypothetical 124.0 k [nrdb_11152004_Chlamydomonas]
  • YBR235W SGDID:S000000439, Chr II from 686896-690258, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YBR235W SGDID:S000000439, Chr II from 686896-690258, Uncharacterized ORF, "Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family; YBR235W is not an essential gene" [yeast-contam.fasta]
  • Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family; YBR235W is not an essential gene; Ybr235wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Uncharacterized membrane protein YBR235W [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized membrane protein YBR235W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR235W PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YBR235W SGDID:S000000439, Chr II from 686901-690263, Genome Release 64-1-1, Uncharacterized ORF, "Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family; YBR235W is not an essential gene" [yeast-030211-contam.fasta]
  • VHC1 SGDID:S000000439, Chr II from 686901-690263, Genome Release 64-2-1, Verified ORF, "Vacuolar membrane cation-chloride cotransporter (CCC); likely mediates K+ and Cl- cotransport into the vacuole; has a role in potassium homeostasis and salt tolerance; similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family" [20141208_orf_trans.fasta]
  • TR6343|c0_g1_i1|g.4522 ORF TR6343|c0_g1_i1|g.4522 TR6343|c0_g1_i1|m.4522 type:complete len:1121 (+) TR6343|c0_g1_i1:84-3446(+) [DBVPG6044_S_cerevisiae-Sep2015-contam.fasta]
  • ID=asmbl_5128|g.3159 ORF ID=asmbl_5128|g.3159 ID=asmbl_5128|m.3159 type:complete len:1121 (+) ID=asmbl_5128:82-3444(+) [DBVPG6044_quiverGenomes_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 1120 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: ion transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRFYQIPG THRPSSAISS SNESSSLLSA RRISQTYFNY QATPECQKVS SKYDPDNPNK  60
   61 DKLGTYDGVF VPTALNVLSI LMFLRFGFIL GQLGIICTIG LLLLSYTINL LTTLSISAIS 120
  121 TNGTVRGGGA YYMISRSLGP EFGGSIGLVF FLGQVFNAGM NAVGIIEPLL YNLGYSAQGE 180
  181 PPAALGELLP RGHWHEFTYA TVILFLCFSV AFVGSQTVSR AGNILFLVLA ASIFSIPLSA 240
  241 LIRSPFTEGG ISYTGPSWQT FHDNLLPHLT KGAAGSLLKG KETFNDLFGV FFPATAGIFA 300
  301 GAGMSSELRK PSKSIPKGTL WGLLFTFICY AVVVFSMGCS IPRRSLYDEV QIIQTISSVQ 360
  361 WVIFMGEMAT SLFSIIVGML GAAYVLEAIA KDNIIPGLEI FAHSPLYSLI FTWILTQLCL 420
  421 FSDVNKIATF ITMTFLMTFV VMNLACFLLG ISSAPNFRPS FKYFNRYTTA IGALLSVVAM 480
  481 LIVDGISASV LFLAMILLFL FIHYFSPPKS WGDVSQSLIY HQVRKYLLRL RQDNIKYWRP 540
  541 QILLFVDNPR TSWNLIRFCN HLKKGGLYIL GHVAVTADFP KQLNELKTQQ KAWMKIRDMA 600
  601 AIKAFVQVGT GPSLIWGIRN VFIGSGLGGM KPNITVVGFF DLESYRKHIP QSRSQNNLQK 660
  661 QVEIKATVPR STCSDVKINV PLPTDECKNE TKVNVQQWVQ IVEDLSLMQS NIAIAHGFKN 720
  721 LEIPNKRDSC FPKKTIDLYP IQMCGKVEAK GDQPAAITTN FDTYTLILQL AAILVTVPEW 780
  781 KRTHSLRVIL FVEQEYHRTN ETQRMKKLLQ VLRIDAEVLV VSLDQFRVYN TIVKGDPIVF 840
  841 DYVNSKLADN EWWKDLVEAR DTLKPKRRFS TIEPQTIAKQ FTQSRKYTSG VQKLGVSFTM 900
  901 NTRMPTNRID TPCESEDSDL DTDLTSIRDA FSASTNISVG KDLTTKSKTG SDRTNLLVKN 960
  961 LQSDVSTQSL RPVFSSNTLP RTRVVEDGTG EQPTLIPIAE PDLSNGNGTG SGIGNGNKLK1020
 1021 KPVLPELSPC CSKDSLVTAM QNLGFNDLPS TAQHLVLNDV MTQMSKSSDL IFSTLPVPAL1080
 1081 GTHEDHDASL QYVEDLDIWL EGLPPCMLIN SQTMTVTTAL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) FPK1 YBR235W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run UTP25 No Comments Hazbun TR, et al. (2003)
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run ASF1 3912: TAP-tagged, strain background includes hpc2(delta) Green EM, et al (2005)
    View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
    View Run MLP2 #35 Asynchronous SPB prep Keck JM, et al. (2011)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YBR235W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..548] MSA 362.667998 View MSA. No confident structure predictions are available.
    2 View Details [549..750] MSA 2.065968 View MSA. No confident structure predictions are available.
    3 View Details [751..903] MSA 3.050996 View MSA. No confident structure predictions are available.
    4 View Details [904..1120] deduced N/A No confident structure predictions are available.
    5 View Details [1028..1120] MSA 1.007976 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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