Protein: | YBR235W |
Organism: | Saccharomyces cerevisiae |
Length: | 1120 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR235W.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1120] | [1..1120] |
|
0.0 | [13..876] | [231..1151] |
|
0.0 | [13..876] | [233..1153] |
|
0.0 | [13..876] | [240..1160] |
|
0.0 | [13..876] | [232..1149] |
|
0.0 | [13..876] | [212..1139] |
Region A: Residues: [1-548] |
1 11 21 31 41 51 | | | | | | 1 MVSRFYQIPG THRPSSAISS SNESSSLLSA RRISQTYFNY QATPECQKVS SKYDPDNPNK 60 61 DKLGTYDGVF VPTALNVLSI LMFLRFGFIL GQLGIICTIG LLLLSYTINL LTTLSISAIS 120 121 TNGTVRGGGA YYMISRSLGP EFGGSIGLVF FLGQVFNAGM NAVGIIEPLL YNLGYSAQGE 180 181 PPAALGELLP RGHWHEFTYA TVILFLCFSV AFVGSQTVSR AGNILFLVLA ASIFSIPLSA 240 241 LIRSPFTEGG ISYTGPSWQT FHDNLLPHLT KGAAGSLLKG KETFNDLFGV FFPATAGIFA 300 301 GAGMSSELRK PSKSIPKGTL WGLLFTFICY AVVVFSMGCS IPRRSLYDEV QIIQTISSVQ 360 361 WVIFMGEMAT SLFSIIVGML GAAYVLEAIA KDNIIPGLEI FAHSPLYSLI FTWILTQLCL 420 421 FSDVNKIATF ITMTFLMTFV VMNLACFLLG ISSAPNFRPS FKYFNRYTTA IGALLSVVAM 480 481 LIVDGISASV LFLAMILLFL FIHYFSPPKS WGDVSQSLIY HQVRKYLLRL RQDNIKYWRP 540 541 QILLFVDN |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [549-750] |
1 11 21 31 41 51 | | | | | | 1 PRTSWNLIRF CNHLKKGGLY ILGHVAVTAD FPKQLNELKT QQKAWMKIRD MAAIKAFVQV 60 61 GTGPSLIWGI RNVFIGSGLG GMKPNITVVG FFDLESYRKH IPQSRSQNNL QKQVEIKATV 120 121 PRSTCSDVKI NVPLPTDECK NETKVNVQQW VQIVEDLSLM QSNIAIAHGF KNLEIPNKRD 180 181 SCFPKKTIDL YPIQMCGKVE AK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [751-903] |
1 11 21 31 41 51 | | | | | | 1 GDQPAAITTN FDTYTLILQL AAILVTVPEW KRTHSLRVIL FVEQEYHRTN ETQRMKKLLQ 60 61 VLRIDAEVLV VSLDQFRVYN TIVKGDPIVF DYVNSKLADN EWWKDLVEAR DTLKPKRRFS 120 121 TIEPQTIAKQ FTQSRKYTSG VQKLGVSFTM NTR |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [904-1120] |
1 11 21 31 41 51 | | | | | | 1 MPTNRIDTPC ESEDSDLDTD LTSIRDAFSA STNISVGKDL TTKSKTGSDR TNLLVKNLQS 60 61 DVSTQSLRPV FSSNTLPRTR VVEDGTGEQP TLIPIAEPDL SNGNGTGSGI GNGNKLKKPV 120 121 LPELSPCCSK DSLVTAMQNL GFNDLPSTAQ HLVLNDVMTQ MSKSSDLIFS TLPVPALGTH 180 181 EDHDASLQYV EDLDIWLEGL PPCMLINSQT MTVTTAL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1028-1120] |
1 11 21 31 41 51 | | | | | | 1 SPCCSKDSLV TAMQNLGFND LPSTAQHLVL NDVMTQMSKS SDLIFSTLPV PALGTHEDHD 60 61 ASLQYVEDLD IWLEGLPPCM LINSQTMTVT TAL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.